Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RPS20P15-201ENST00000412792 311 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 SNORD56-201ENST00000413522 71 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 AC093155.1-201ENST00000440164 826 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 HMGB1P5-202ENST00000451497 985 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 ATG12P2-201ENST00000456830 416 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 AC091959.2-201ENST00000477363 321 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 AC055855.1-201ENST00000489563 579 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 OR4G11P-201ENST00000492842 939 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 AC096725.1-201ENST00000514266 313 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 MTND4LP31-201ENST00000514859 294 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 AC008885.1-201ENST00000514930 301 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 SNORA70.16-201ENST00000516390 95 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 CASP1P1-201ENST00000526345 212 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 AC007229.1-201ENST00000590455 412 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 AC025165.5-201ENST00000602802 578 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 AC024940.4-201ENST00000605507 246 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 AC120053.1-201ENST00000607706 736 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 AL445423.1-201ENST00000609941 536 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 AL450472.3-201ENST00000615578 367 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 MIR6132-201ENST00000622083 109 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 CR392039.5-201ENST00000623201 510 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 MIR6830-201ENST00000636015 70 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CHKB-CPT1BH3BT56 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 RNU1-33P-201ENST00000364249 162 ntBASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 RNU6-712P-201ENST00000410558 100 ntBASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 AC087499.2-201ENST00000432861 149 ntBASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 AC236972.1-201ENST00000433225 199 ntBASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 YWHAZP8-201ENST00000436935 731 ntBASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 TPT1P14-201ENST00000448018 505 ntBASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 MTCO1P42-201ENST00000457379 726 ntBASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 snoU13.28-201ENST00000459235 104 ntBASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 RNU7-23P-201ENST00000459465 62 ntBASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 DYNLL1P5-201ENST00000467158 270 ntBASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 AC004263.1-201ENST00000479327 332 ntBASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 OR52A4P-202ENST00000481634 799 ntBASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 OR52A4P-203ENST00000498233 1014 ntBASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 AC020699.1-201ENST00000505161 445 ntBASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 HMGN1P15-201ENST00000513870 295 ntBASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 SNORA31.23-201ENST00000517219 133 ntBASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 PSMA2P1-201ENST00000526365 646 ntBASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 AC068790.4-201ENST00000602474 263 ntBASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 NTAN1P1-201ENST00000603150 646 ntBASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 AC067747.1-201ENST00000608026 250 ntBASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 AL159169.3-201ENST00000608871 561 ntBASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 AL353748.2-201ENST00000622148 471 ntBASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 AC016717.3-201ENST00000624730 554 ntBASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 AL161912.2-201ENST00000565707 3007 ntBASIC1.19□□□□□ -2.22
CHKB-CPT1BH3BT56 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 RNU6-270P-201ENST00000364131 105 ntBASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 RNA5SP160-201ENST00000364866 120 ntBASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 SNORA54-201ENST00000384281 123 ntBASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 DSTNP4-201ENST00000399472 474 ntBASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 RPS4XP8-201ENST00000402039 771 ntBASIC1.18□□□□□ -2.22
CHKB-CPT1BH3BT56 AL512604.1-201ENST00000404812 257 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms