Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 SNORA11.3-201ENST00000408471 128 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 RAB28P1-201ENST00000411517 641 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 AL513331.1-201ENST00000411908 397 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 HMGB3P20-201ENST00000417997 600 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 AL445669.1-201ENST00000426743 755 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 BX890604.2-201ENST00000427883 474 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 BX679664.1-201ENST00000434429 253 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 FTH1P1-201ENST00000437933 532 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 AC087588.1-201ENST00000462203 316 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 RPS23P7-201ENST00000466210 444 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 RPL27AP5-201ENST00000469428 449 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 AC020893.1-201ENST00000502452 580 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 OR5M14P-201ENST00000506803 618 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 UBTFL10-201ENST00000528532 562 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 AC009643.1-201ENST00000532030 391 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 AC128657.1-201ENST00000549459 145 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 SETP2-201ENST00000553886 926 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 BNIP3P23-201ENST00000599655 511 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 DPPA3P3-201ENST00000603842 430 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 RNU6-88P-201ENST00000606801 100 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 AC007349.4-201ENST00000608114 532 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 AC131902.3-201ENST00000611767 581 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 SNORA11.6-201ENST00000619030 128 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 AC079684.1-201ENST00000621405 437 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 MIR4302-201ENST00000638058 60 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 AC008669.1-201ENST00000565823 2178 ntBASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HMGB1P1B2RPK0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 AC092125.1-201ENST00000562568 1995 ntBASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 MIR30E-201ENST00000362104 92 ntBASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 RNU6-884P-201ENST00000363889 107 ntBASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 RNA5SP42-201ENST00000364278 115 ntBASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 RPS7P13-201ENST00000413955 498 ntBASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 SSR1P2-201ENST00000415208 787 ntBASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 AC010153.1-201ENST00000432862 727 ntBASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 MTCO3P45-201ENST00000443036 613 ntBASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 MTATP6P30-201ENST00000443540 664 ntBASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 FAM103A2P-201ENST00000444122 354 ntBASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 RPL23AP24-201ENST00000458203 385 ntBASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 RPS4XP2-201ENST00000458402 793 ntBASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 RPS20P22-201ENST00000473700 357 ntBASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 AC093809.1-201ENST00000509155 340 ntBASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 CR383656.6-201ENST00000550518 394 ntBASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 VN1R92P-201ENST00000598511 928 ntBASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 AL161729.4-201ENST00000604650 476 ntBASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 AL137843.1-201ENST00000605078 385 ntBASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 AC024940.4-201ENST00000605507 246 ntBASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 AL139418.1-201ENST00000613613 177 ntBASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 MIR6780A-201ENST00000615089 68 ntBASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 AC100827.5-201ENST00000615883 426 ntBASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 ZNF833P-201ENST00000424938 1494 ntBASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGB1P1B2RPK0 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.81
HMGB1P1B2RPK0 AC138915.1-201ENST00000565427 1685 ntBASIC3.78□□□□□ -1.81
HMGB1P1B2RPK0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.78□□□□□ -1.81
HMGB1P1B2RPK0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
HMGB1P1B2RPK0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HMGB1P1B2RPK0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.77□□□□□ -1.81
HMGB1P1B2RPK0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HMGB1P1B2RPK0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
HMGB1P1B2RPK0 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
HMGB1P1B2RPK0 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HMGB1P1B2RPK0 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HMGB1P1B2RPK0 DYNLT3P1-201ENST00000378574 347 ntBASIC3.77□□□□□ -1.81
HMGB1P1B2RPK0 RAP1BP1-201ENST00000412709 553 ntBASIC3.77□□□□□ -1.81
HMGB1P1B2RPK0 RPL21P24-201ENST00000413752 448 ntBASIC3.77□□□□□ -1.81
HMGB1P1B2RPK0 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.77□□□□□ -1.81
HMGB1P1B2RPK0 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.77□□□□□ -1.81
HMGB1P1B2RPK0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms