Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRC53A6NM62 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRC53A6NM62 SNORD116-9-201ENST00000384000 95 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 SNORD116-3-201ENST00000384287 95 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 SNORD116-7-201ENST00000384404 95 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 SNORD116-5-201ENST00000384462 95 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 SNORD3H-201ENST00000384486 214 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 RNU6-55P-201ENST00000411092 107 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 RNU6-954P-201ENST00000411355 107 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.8□□□□□ -1.8
LRRC53A6NM62 DBIP2-201ENST00000419076 262 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRC53A6NM62 CYCSP46-201ENST00000423569 204 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 AC017083.1-201ENST00000428093 483 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 AC098826.1-201ENST00000433943 471 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 MTND4P32-201ENST00000437189 1237 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 AL138799.3-201ENST00000438968 350 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRC53A6NM62 H2AFZP6-201ENST00000444403 394 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 COX6CP12-201ENST00000446748 202 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 MTCO1P42-201ENST00000457379 726 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.8□□□□□ -1.8
LRRC53A6NM62 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRC53A6NM62 AC010285.1-201ENST00000470580 392 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 AC021382.1-201ENST00000483523 359 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.8□□□□□ -1.8
LRRC53A6NM62 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRC53A6NM62 AC005921.1-201ENST00000510589 286 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRC53A6NM62 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRC53A6NM62 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.8□□□□□ -1.8
LRRC53A6NM62 MED28P5-201ENST00000528254 438 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.8□□□□□ -1.8
LRRC53A6NM62 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.8□□□□□ -1.8
LRRC53A6NM62 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRC53A6NM62 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
LRRC53A6NM62 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 ACTR3BP3-201ENST00000565577 979 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 U73023.1-201ENST00000603134 700 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 AC091965.4-201ENST00000607691 587 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 AC092354.2-201ENST00000607786 514 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRC53A6NM62 AC008121.2-201ENST00000614647 523 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 AL391261.4-201ENST00000616012 481 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 AC002550.2-201ENST00000621246 394 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 AP003355.3-201ENST00000623465 114 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 AC112200.1-201ENST00000625015 234 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 AL645937.1-201ENST00000641739 1652 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 OTUD4P1-201ENST00000237841 3067 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 CCT4P2-201ENST00000233836 1548 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LRRC53A6NM62 AC058791.1-201ENST00000608412 3198 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC53A6NM62 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC53A6NM62 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.79□□□□□ -1.8
LRRC53A6NM62 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC53A6NM62 PRO1804-201ENST00000623780 2050 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 FRG1BP-201ENST00000278882 761 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 RNU6-1155P-201ENST00000363554 107 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 RNA5SP51-201ENST00000364750 119 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LRRC53A6NM62 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRC53A6NM62 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRC53A6NM62 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.79□□□□□ -1.8
LRRC53A6NM62 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRC53A6NM62 AC079780.1-201ENST00000428259 207 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 AC004975.1-201ENST00000428733 208 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.79□□□□□ -1.8
LRRC53A6NM62 AC109583.1-201ENST00000432156 268 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.79□□□□□ -1.8
LRRC53A6NM62 AL357552.1-201ENST00000445254 415 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.79□□□□□ -1.8
LRRC53A6NM62 NUTF2P7-201ENST00000453086 375 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 SNORD121B-201ENST00000458838 81 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 snoU13.24-201ENST00000458998 104 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 RNU7-170P-201ENST00000459303 61 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.79□□□□□ -1.8
LRRC53A6NM62 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.79□□□□□ -1.8
LRRC53A6NM62 UBE2CP3-201ENST00000502715 450 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRC53A6NM62 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LRRC53A6NM62 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LRRC53A6NM62 AF131216.2-201ENST00000512316 564 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.79□□□□□ -1.8
LRRC53A6NM62 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRC53A6NM62 SNORA70.14-201ENST00000516205 110 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 AC025881.1-201ENST00000518851 512 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRC53A6NM62 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.79□□□□□ -1.8
LRRC53A6NM62 AC018630.1-201ENST00000541376 925 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.79□□□□□ -1.8
LRRC53A6NM62 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.79□□□□□ -1.8
LRRC53A6NM62 PARP1P2-201ENST00000556806 195 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 AC012414.6-201ENST00000568241 401 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRC53A6NM62 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC53A6NM62 AC067959.1-201ENST00000604334 379 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 AC080013.6-201ENST00000606185 215 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 AC012360.2-201ENST00000609349 391 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms