Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 AP000907.2-201ENST00000530827 353 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 AC090022.1-201ENST00000546569 311 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 RNU6-89P-201ENST00000606519 100 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 MIR6862-1-201ENST00000613016 70 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 AL512624.1-201ENST00000613638 469 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 MIR6862-2-201ENST00000614755 70 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 AL023881.1-201ENST00000621088 301 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 AC040168.1-201ENST00000623594 991 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 MTND5P33-201ENST00000571250 1450 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 SAMMSON-226ENST00000642089 1582 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 DHX40P1-201ENST00000588725 1412 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 MTND5P1-201ENST00000445440 1375 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 ASNSP3-201ENST00000451989 1306 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 RNU6-28P-201ENST00000362378 107 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 RN7SKP95-201ENST00000362860 303 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 RNU4-48P-201ENST00000365559 182 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 Y_RNA.493-201ENST00000384422 102 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 RNU6-821P-201ENST00000390995 107 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 RNU4-26P-201ENST00000410270 107 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 Y_RNA.615-201ENST00000410769 117 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 OR1AA1P-201ENST00000419597 916 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 AC092832.1-201ENST00000422934 400 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 AC093156.1-201ENST00000440382 670 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 HMGN2P21-201ENST00000447764 270 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 AC073415.1-201ENST00000449240 153 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 HMGB1P15-201ENST00000453854 435 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 RNA5SP103-201ENST00000459503 118 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 AC108751.2-201ENST00000469993 231 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 AC027575.1-201ENST00000481064 460 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 AC114797.1-201ENST00000514003 728 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 RNU6-559P-201ENST00000516151 98 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 RNA5SP34-201ENST00000516887 130 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 AC008694.2-201ENST00000517591 306 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 AP003497.1-201ENST00000528472 562 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 DYNLL1P4-201ENST00000549314 266 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 NCAPGP2-201ENST00000557911 754 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 FRG2DP-202ENST00000566967 323 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 MIR3146-201ENST00000580367 79 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 AC020910.3-201ENST00000603701 874 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 DPPA3P3-201ENST00000603842 430 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 AC124312.5-201ENST00000604451 268 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 AC080078.3-201ENST00000605407 463 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 AL121932.1-201ENST00000605542 214 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 AL627309.6-201ENST00000606857 840 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 MIR6729-201ENST00000618194 65 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 TLK1P1-201ENST00000456760 2440 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 AC099654.2-201ENST00000433031 1980 ntBASIC3.82□□□□□ -1.8
CGB1A6NKQ9 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.82□□□□□ -1.8
CGB1A6NKQ9 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms