Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 RNA5SP443-201ENST00000363083 132 ntBASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 RNU6-263P-201ENST00000363811 107 ntBASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 AL807761.1-201ENST00000417622 171 ntBASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 OR2B8P-201ENST00000432841 938 ntBASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 MTND3P21-201ENST00000433774 331 ntBASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 MTND1P1-201ENST00000445453 368 ntBASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 AL121877.1-201ENST00000453704 622 ntBASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 RPL7P15-201ENST00000461190 712 ntBASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 RPS7P7-201ENST00000463499 571 ntBASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 MTND1P3-201ENST00000484956 952 ntBASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 AC107401.1-201ENST00000503426 685 ntBASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 KCTD9P5-201ENST00000504141 1170 ntBASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 NPM1P41-201ENST00000512920 831 ntBASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 OR4R3P-201ENST00000525084 838 ntBASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 AP003181.2-201ENST00000528941 181 ntBASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 AC016957.1-201ENST00000534895 309 ntBASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 AC123904.2-201ENST00000548059 300 ntBASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 DUXAP4-201ENST00000603046 613 ntBASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 MIR6716-201ENST00000613413 80 ntBASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 AC136475.10-201ENST00000620253 385 ntBASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 BMS1P21-201ENST00000634565 365 ntBASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
TCRBV7S3A2A0A539 AC027514.1-201ENST00000588561 1603 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 GNG5P1-201ENST00000255500 204 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 RN7SKP226-201ENST00000364912 300 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 U1.1-201ENST00000384101 164 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 RNU6-837P-201ENST00000391056 108 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AL049693.1-201ENST00000402760 611 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 FCF1P9-201ENST00000412546 282 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AC093392.2-201ENST00000450682 337 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AC055855.1-201ENST00000489563 579 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AC012170.1-201ENST00000495139 359 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AL139099.1-201ENST00000497398 403 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AC114967.1-201ENST00000504890 259 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AL117351.2-201ENST00000513571 157 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AC017037.2-201ENST00000513850 890 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AC090281.1-201ENST00000523019 276 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AL356432.3-201ENST00000568952 465 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AC120057.2-201ENST00000571520 271 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 MIR3118-1-201ENST00000581787 76 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AC060771.1-201ENST00000582031 164 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AC108747.1-201ENST00000609508 535 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AC092794.1-201ENST00000612734 582 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AL356585.4-201ENST00000623078 1229 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AC067931.1-201ENST00000624190 671 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AC068137.3-201ENST00000639191 341 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 AC073869.6-201ENST00000640656 341 ntBASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
TCRBV7S3A2A0A539 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
TCRBV7S3A2A0A539 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.84□□□□□ -1.8
TCRBV7S3A2A0A539 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
TCRBV7S3A2A0A539 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms