Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.05□□□□□ -2.08
TRAV41A0A0B4J266 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 RNU1-100P-201ENST00000365255 165 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 RNU6-921P-201ENST00000384361 107 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 RNA5SP210-201ENST00000391034 120 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 AL356057.1-202ENST00000402263 756 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 CYCSP45-201ENST00000402289 315 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 HMGN2P35-201ENST00000412164 270 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 RPS20P25-201ENST00000412447 352 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 TATDN1P1-201ENST00000414123 891 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 USP9YP20-201ENST00000419224 558 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 MTND5P31-201ENST00000419366 1374 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 AL691517.1-201ENST00000440833 1235 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 AC011816.1-201ENST00000441346 546 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 BX248409.1-201ENST00000455497 255 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 RNA5SP282-201ENST00000516355 108 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 RPPH1-2P-201ENST00000516688 293 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 OR7K1P-201ENST00000546439 926 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 ATP5F1P7-201ENST00000567330 760 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 AC008739.2-201ENST00000597006 317 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 AF131215.7-201ENST00000602443 707 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 AL020997.3-201ENST00000602843 359 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 BNIP3P4-201ENST00000604946 565 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 AC106900.2-201ENST00000604994 317 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 AC096586.1-201ENST00000610267 561 ntBASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
TRAV41A0A0B4J266 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 AC025263.3-201ENST00000622965 1396 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 AL513185.3-201ENST00000433335 1300 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 AL672167.1-206ENST00000356293 943 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 RNU6-730P-201ENST00000383954 104 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 MIR592-201ENST00000384959 97 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 MIR627-201ENST00000384979 97 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 AC096533.1-201ENST00000411645 353 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 AC092638.1-201ENST00000411966 1275 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 AL513175.2-201ENST00000422071 443 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 MTND2P19-201ENST00000449129 1012 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 AL109933.2-201ENST00000452651 260 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 AL359385.1-201ENST00000456509 365 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 NAP1L1P3-201ENST00000462291 880 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 MTND5P4-201ENST00000514978 288 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 RNU6-416P-201ENST00000516265 103 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 RN7SKP40-201ENST00000517211 242 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 MTCO1P47-201ENST00000523889 1271 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 OR8K4P-201ENST00000534608 872 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 ELOCP31-201ENST00000540463 467 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 AC126177.3-201ENST00000551839 688 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 MIR5092-201ENST00000583139 88 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 AC024560.3-201ENST00000608482 349 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 AC068722.2-201ENST00000618734 544 ntBASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRAV41A0A0B4J266 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
TRAV41A0A0B4J266 AC087359.1-201ENST00000508335 1740 ntBASIC2.03□□□□□ -2.09
TRAV41A0A0B4J266 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 AL049780.3-201ENST00000624612 1583 ntBASIC2.02□□□□□ -2.09
TRAV41A0A0B4J266 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms