Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC013468.1-201ENST00000608680 598 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AC090912.3-201ENST00000609775 533 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AC020658.4-201ENST00000613987 684 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 MIR6732-201ENST00000619365 60 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AL445528.2-201ENST00000620582 470 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 ADAM3A-203ENST00000461344 2157 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AC016717.2-201ENST00000609089 5141 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 TPTE2P4-201ENST00000258589 1605 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 FTLP6-201ENST00000355274 422 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 MIR345-201ENST00000362114 98 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 SNORD62.1-201ENST00000362541 86 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 Y_RNA.209-201ENST00000364156 111 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 RNU4-42P-201ENST00000364738 142 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 XGY1-201ENST00000381172 446 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 RNU6-997P-201ENST00000384725 107 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AL359511.1-201ENST00000402970 211 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AL450338.1-201ENST00000407987 512 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 KRR1P1-201ENST00000419430 803 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AL360081.1-201ENST00000428299 555 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AL117339.2-201ENST00000430475 180 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 MTCO1P45-201ENST00000431457 267 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AL714022.1-201ENST00000439897 151 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AC093155.1-201ENST00000440164 826 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AL591719.1-201ENST00000444669 744 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 RPL7P12-201ENST00000446719 750 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 MTND4LP3-201ENST00000468320 276 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AC117394.1-201ENST00000477323 567 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AC116337.2-201ENST00000477662 156 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AC004815.1-201ENST00000484185 331 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 OR4V1P-201ENST00000525394 1140 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 MIR4271-201ENST00000582451 67 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AC009303.3-201ENST00000591103 736 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AC078899.2-201ENST00000595282 212 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AL020997.2-201ENST00000602607 184 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 BNIP3P11-201ENST00000603878 563 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AC025588.2-201ENST00000604851 466 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AL450472.3-201ENST00000615578 367 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AP000346.3-201ENST00000622821 210 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AC116618.1-201ENST00000634617 774 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AC244258.1-201ENST00000637553 1071 ntBASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC1.1□□□□□ -2.23
LINC01558Q9Y6Z2 AL359837.1-201ENST00000381357 287 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 RPL21P17-201ENST00000397467 475 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 SSXP10-201ENST00000402595 565 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 AL512604.1-201ENST00000404812 257 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 CYCSP48-201ENST00000417124 323 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 AC022018.1-201ENST00000430685 241 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 AC092573.2-201ENST00000434546 243 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 RPS15AP28-201ENST00000435088 386 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 AC005019.1-201ENST00000436455 431 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 PPP1R2P5-201ENST00000457256 603 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 MTCO1P42-201ENST00000457379 726 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 RNU7-23P-201ENST00000459465 62 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 DYNLL1P5-201ENST00000467158 270 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 BZW1P2-201ENST00000473537 826 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 RN7SL132P-201ENST00000478131 296 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 AC073522.1-201ENST00000483312 377 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 AC113398.2-201ENST00000507630 558 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 PRELID3BP5-201ENST00000508612 460 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 FABP5P6-201ENST00000510588 409 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms