Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 AC090453.1-201ENST00000495560 436 ntBASIC3.11□□□□□ -1.91
AP4B1Q9Y6B7 AC008837.2-201ENST00000513076 418 ntBASIC3.11□□□□□ -1.91
AP4B1Q9Y6B7 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
AP4B1Q9Y6B7 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.11□□□□□ -1.91
AP4B1Q9Y6B7 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.11□□□□□ -1.91
AP4B1Q9Y6B7 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.11□□□□□ -1.91
AP4B1Q9Y6B7 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.11□□□□□ -1.91
AP4B1Q9Y6B7 SETP7-201ENST00000552169 453 ntBASIC3.11□□□□□ -1.91
AP4B1Q9Y6B7 MTCYBP23-201ENST00000558717 1102 ntBASIC3.11□□□□□ -1.91
AP4B1Q9Y6B7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.11□□□□□ -1.91
AP4B1Q9Y6B7 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.11□□□□□ -1.91
AP4B1Q9Y6B7 AC055876.1-202ENST00000567053 138 ntBASIC3.11□□□□□ -1.91
AP4B1Q9Y6B7 RN7SL339P-201ENST00000580597 296 ntBASIC3.11□□□□□ -1.91
AP4B1Q9Y6B7 AC106900.2-201ENST00000604994 317 ntBASIC3.11□□□□□ -1.91
AP4B1Q9Y6B7 AL139022.2-201ENST00000606934 443 ntBASIC3.11□□□□□ -1.91
AP4B1Q9Y6B7 AC012314.7-201ENST00000619693 93 ntBASIC3.11□□□□□ -1.91
AP4B1Q9Y6B7 AL356585.4-201ENST00000623078 1229 ntBASIC3.11□□□□□ -1.91
AP4B1Q9Y6B7 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.11□□□□□ -1.91
AP4B1Q9Y6B7 AC084035.1-201ENST00000634543 607 ntBASIC3.11□□□□□ -1.91
AP4B1Q9Y6B7 U6.105-201ENST00000637379 88 ntBASIC3.11□□□□□ -1.91
AP4B1Q9Y6B7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
AP4B1Q9Y6B7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
AP4B1Q9Y6B7 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
AP4B1Q9Y6B7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
AP4B1Q9Y6B7 NACA3P-201ENST00000359690 648 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 RNU6-413P-201ENST00000384115 107 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 RPS4XP3-201ENST00000398541 413 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 U3.42-201ENST00000408746 214 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 RNA5SP80-201ENST00000410475 111 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 RNU2-47P-201ENST00000410649 186 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 AC093151.1-201ENST00000427711 313 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 EZH2P1-201ENST00000431167 291 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 AC005019.1-201ENST00000436455 431 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 AL590664.1-201ENST00000448065 339 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 EXOSC3P1-201ENST00000448649 500 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 RPL7P5-201ENST00000471472 736 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 RPL30P14-201ENST00000482744 348 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 MTCYBP17-201ENST00000503579 789 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 MTATP6P9-201ENST00000515039 680 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 HSPA8P13-201ENST00000523715 472 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 OR10V3P-201ENST00000525712 725 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 AC007458.1-201ENST00000542812 373 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 MIR3944-201ENST00000581277 108 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 AC106791.2-201ENST00000604680 391 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 AC080013.4-201ENST00000607624 649 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 AL136370.1-201ENST00000608166 691 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 AC025588.4-201ENST00000615802 908 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 AL138880.2-201ENST00000616214 239 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 AC091046.2-201ENST00000620775 665 ntBASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
AP4B1Q9Y6B7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 AC092435.3-201ENST00000565538 3654 ntBASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 RNU6-1155P-201ENST00000363554 107 ntBASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 DHFRP6-201ENST00000401776 268 ntBASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 RPS3AP37-201ENST00000419176 745 ntBASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 AL137014.1-201ENST00000420490 1226 ntBASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 AC007742.1-201ENST00000425789 329 ntBASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 AL590233.1-201ENST00000430017 456 ntBASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 ELOCP26-201ENST00000436067 329 ntBASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 MUPP-201ENST00000438111 566 ntBASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 AC004866.2-201ENST00000438285 481 ntBASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 AL589880.1-201ENST00000448271 287 ntBASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 AC093392.2-201ENST00000450682 337 ntBASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 PRSS3P4-201ENST00000453323 162 ntBASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 AP001992.1-205ENST00000462248 379 ntBASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 AC023424.2-201ENST00000493479 777 ntBASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 AC114981.1-201ENST00000503897 678 ntBASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 WBP1LP4-201ENST00000505043 344 ntBASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 RNU6-583P-201ENST00000516012 92 ntBASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 IGKV2-26-201ENST00000518305 343 ntBASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 AC239860.2-201ENST00000525886 270 ntBASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.09□□□□□ -1.91
AP4B1Q9Y6B7 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms