Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AC023158.1-201ENST00000561632 1025 ntBASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 AL160394.1-201ENST00000624765 724 ntBASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.43□□□□□ -2.02
SCN10AQ9Y5Y9 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 ZNF72P-201ENST00000425869 1908 ntBASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 ZNF355P-201ENST00000427301 3216 ntBASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 SNORA25.6-201ENST00000364121 118 ntBASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 RNU6-482P-201ENST00000391068 107 ntBASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 AC098826.1-201ENST00000433943 471 ntBASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 OR5BN1P-201ENST00000532955 829 ntBASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 AC015712.3-201ENST00000559380 164 ntBASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 AC115989.2-201ENST00000578640 563 ntBASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 AP001029.3-201ENST00000588063 596 ntBASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 MIR6845-201ENST00000613182 61 ntBASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 HSPA8P4-201ENST00000511877 1920 ntBASIC2.42□□□□□ -2.02
SCN10AQ9Y5Y9 RNU6-386P-201ENST00000362650 107 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 RNU2-2P-201ENST00000410396 191 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 ELOCP13-201ENST00000443934 329 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 SSXP4-201ENST00000451349 245 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 AC008571.1-201ENST00000467232 300 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 RPS4XP6-201ENST00000477670 797 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 U2.15-201ENST00000611544 191 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 U2.16-201ENST00000613119 191 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 U2.12-201ENST00000613778 191 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 U2.20-201ENST00000613956 192 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 U2.9-201ENST00000615427 191 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 U2.11-201ENST00000616345 191 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 U2.2-201ENST00000616535 191 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 U2.3-201ENST00000617785 191 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 U2.19-201ENST00000618602 191 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 RNU2-1-201ENST00000618664 191 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 U2.6-201ENST00000619225 191 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 U2.5-201ENST00000619465 191 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 U2.10-201ENST00000620268 191 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 U8.8-201ENST00000365399 135 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 SNORA48.3-201ENST00000391081 134 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 AC104689.1-201ENST00000473356 768 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 AC116337.1-201ENST00000509680 687 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 AC007536.1-201ENST00000533382 349 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 AC018630.1-201ENST00000541376 925 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 AC010378.1-201ENST00000619270 362 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 AL161431.1-201ENST00000618966 4205 ntBASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
SCN10AQ9Y5Y9 RNU6-1181P-201ENST00000384191 106 ntBASIC2.4□□□□□ -2.02
SCN10AQ9Y5Y9 AL121972.1-201ENST00000402023 252 ntBASIC2.4□□□□□ -2.02
SCN10AQ9Y5Y9 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.4□□□□□ -2.02
SCN10AQ9Y5Y9 SDCBPP3-201ENST00000419629 891 ntBASIC2.4□□□□□ -2.02
SCN10AQ9Y5Y9 RPL17P49-201ENST00000443728 411 ntBASIC2.4□□□□□ -2.02
SCN10AQ9Y5Y9 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
SCN10AQ9Y5Y9 AC089999.1-201ENST00000460336 374 ntBASIC2.4□□□□□ -2.02
SCN10AQ9Y5Y9 AC004263.1-201ENST00000479327 332 ntBASIC2.4□□□□□ -2.02
SCN10AQ9Y5Y9 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.4□□□□□ -2.02
SCN10AQ9Y5Y9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.4□□□□□ -2.02
SCN10AQ9Y5Y9 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.4□□□□□ -2.02
SCN10AQ9Y5Y9 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.4□□□□□ -2.02
SCN10AQ9Y5Y9 TPMTP1-201ENST00000592307 737 ntBASIC2.4□□□□□ -2.02
SCN10AQ9Y5Y9 AL133393.1-201ENST00000603277 287 ntBASIC2.4□□□□□ -2.02
SCN10AQ9Y5Y9 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.4□□□□□ -2.02
SCN10AQ9Y5Y9 AP001521.1-201ENST00000609150 300 ntBASIC2.4□□□□□ -2.02
SCN10AQ9Y5Y9 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.4□□□□□ -2.02
SCN10AQ9Y5Y9 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.4□□□□□ -2.02
SCN10AQ9Y5Y9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SCN10AQ9Y5Y9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
SCN10AQ9Y5Y9 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
SCN10AQ9Y5Y9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.4□□□□□ -2.03
SCN10AQ9Y5Y9 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SCN10AQ9Y5Y9 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms