Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 SNORA70.18-201ENST00000516696 98 ntBASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 IGKV2D-19-201ENST00000523346 262 ntBASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 YWHAQP7-201ENST00000603536 658 ntBASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 AP000254.1-201ENST00000609934 520 ntBASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 AC008121.2-201ENST00000614647 523 ntBASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 AC093908.1-201ENST00000623125 8092 ntBASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 AC007656.2-201ENST00000624902 4547 ntBASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 MTND4P16-201ENST00000466108 1367 ntBASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.87□□□□□ -1.79
SNX9Q9Y5X1 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 SNORA7.2-201ENST00000364446 145 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 RNU6-1226P-201ENST00000384317 107 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 MIR449B-201ENST00000384995 97 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 RNA5SP171-201ENST00000391071 115 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AC016769.3-201ENST00000396562 315 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 DEFB108C-201ENST00000400154 252 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 DHFRP6-201ENST00000401776 268 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 HSPE1P26-201ENST00000405341 275 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 MTHFD2P2-201ENST00000407725 247 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 MTCO3P41-201ENST00000414801 328 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 MTCO2P34-201ENST00000421994 607 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AC005517.2-201ENST00000424673 553 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AC096632.1-201ENST00000427395 310 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 HMGN2P31-201ENST00000432430 273 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 RPL21P112-201ENST00000434403 463 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 MTND4P6-201ENST00000438297 472 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 ATP5C1P1-201ENST00000441945 895 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 USP9YP29-201ENST00000445112 563 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 ST13P20-201ENST00000447996 1065 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 MTCO1P27-201ENST00000448269 226 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 RNU7-136P-201ENST00000458819 69 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 RN7SL93P-201ENST00000463035 293 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AC114981.1-201ENST00000503897 678 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AC021146.1-201ENST00000511202 716 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AC005798.1-201ENST00000513715 387 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AC104057.1-201ENST00000515547 497 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 ZNF705CP-201ENST00000530515 889 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AL133457.1-201ENST00000564251 987 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 ZNF192P1-203ENST00000565888 810 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 MIR4504-201ENST00000577413 92 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AP001004.1-201ENST00000582468 324 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 MIR3922-201ENST00000585192 84 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AC012065.4-201ENST00000602445 679 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AP000403.1-201ENST00000603349 851 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AC006077.1-201ENST00000604746 343 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AC128687.1-201ENST00000605304 619 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AC087752.4-201ENST00000605911 462 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AC012360.2-201ENST00000609349 391 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AC068722.2-201ENST00000618734 544 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 U6.101-201ENST00000637707 76 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 GDI2P1-201ENST00000429312 1336 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 ELL2P4-201ENST00000446870 1376 ntBASIC3.86□□□□□ -1.79
SNX9Q9Y5X1 AP002907.1-201ENST00000606361 1430 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms