Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 FTH1P1-201ENST00000437933 532 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 WASF1P1-201ENST00000447560 1131 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 RPS17P13-201ENST00000448974 407 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 AC022364.2-201ENST00000457963 554 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 AC022795.1-201ENST00000473808 480 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 AC092989.1-201ENST00000481235 277 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 AC105914.1-201ENST00000511798 226 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 FTH1P21-201ENST00000512179 511 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 RNA5SP337-201ENST00000517007 109 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 MIR2116-201ENST00000517221 80 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 AC022616.3-201ENST00000523940 148 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 AP000857.1-201ENST00000532151 543 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 AL512360.1-201ENST00000555346 234 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 AC025884.1-201ENST00000556034 378 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 SUB1P2-201ENST00000556401 297 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 AC025678.1-201ENST00000567861 338 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 RPL23AP97-201ENST00000568955 471 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 AC006254.3-201ENST00000603353 884 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 AC139792.3-201ENST00000623525 224 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 AC009161.2-201ENST00000624626 138 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 AL356489.2-201ENST00000566968 3528 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.4□□□□□ -1.7
PCDHB1Q9Y5F3 LINC01109-201ENST00000603837 3081 ntBASIC4.4□□□□□ -1.7
PCDHB1Q9Y5F3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.4□□□□□ -1.7
PCDHB1Q9Y5F3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHB1Q9Y5F3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHB1Q9Y5F3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHB1Q9Y5F3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHB1Q9Y5F3 AC010300.1-201ENST00000600671 5134 ntBASIC4.4□□□□□ -1.7
PCDHB1Q9Y5F3 OR5J1P-201ENST00000313544 939 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 Y_RNA.256-201ENST00000364594 104 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 RNU6-169P-201ENST00000365336 107 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 RNU6-108P-201ENST00000365558 107 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 RNU6-456P-201ENST00000384493 107 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 RPS26P8-201ENST00000393490 348 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 HDGFP1-201ENST00000405943 252 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 RNU6-516P-201ENST00000411381 104 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 AC092447.6-201ENST00000414578 210 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 OR1AA1P-201ENST00000419597 916 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 AC011998.1-201ENST00000433403 117 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 AC079781.2-201ENST00000446424 169 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 VN1R34P-201ENST00000447387 883 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 TPT1P14-201ENST00000448018 505 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 AC234775.1-201ENST00000454247 670 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 SNORA84-201ENST00000459229 133 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 RPS27AP17-201ENST00000463344 455 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 AC105137.1-201ENST00000484355 562 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 RN7SL810P-201ENST00000493031 276 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 RN7SL812P-201ENST00000493791 279 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 AC108145.1-201ENST00000503770 153 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 Y_RNA.693-201ENST00000516641 110 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 AC109635.3-201ENST00000529536 185 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 CBX3P7-201ENST00000532876 502 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 OR4T1P-201ENST00000554933 911 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 AC093227.2-201ENST00000589357 285 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 AL391646.1-201ENST00000603860 190 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 AL158211.4-201ENST00000606988 584 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 AC020634.1-201ENST00000608701 549 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 LINC01355-201ENST00000566551 5444 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 AC105074.1-201ENST00000623380 3095 ntBASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHB1Q9Y5F3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms