Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 MTND5P29-201ENST00000458676 1807 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 RNA5SP509-201ENST00000364577 119 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 SNORA23-201ENST00000365128 182 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 RN7SKP159-201ENST00000410657 292 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 RN7SKP27-201ENST00000410684 333 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 RN7SKP33-201ENST00000410942 340 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 RNU6-195P-201ENST00000411352 109 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 RNA5SP107-201ENST00000411358 122 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AC104850.1-201ENST00000435940 476 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AC005094.1-201ENST00000440420 368 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AC016696.1-201ENST00000446949 318 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AC012671.1-201ENST00000451912 203 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AC109327.1-201ENST00000471666 403 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 NIPA2P2-201ENST00000496376 1083 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AC068305.1-201ENST00000497406 726 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AL358832.1-201ENST00000497800 389 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 RPL37P25-201ENST00000507308 276 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AC091133.4-201ENST00000511142 308 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 RNU2-58P-201ENST00000516403 183 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 RN7SKP244-201ENST00000516513 307 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 Vault.3-201ENST00000516676 95 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 RNA5SP337-201ENST00000517007 109 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 RNU6-64P-201ENST00000517119 105 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AC100870.1-201ENST00000522035 505 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AP001781.1-201ENST00000530977 207 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AL109766.1-201ENST00000555080 552 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 EIF1P4-201ENST00000572664 335 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AC023575.1-201ENST00000580510 358 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AC068790.6-201ENST00000602558 258 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AC006023.2-201ENST00000609916 167 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AC019278.1-201ENST00000623516 479 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AC095031.1-201ENST00000623685 672 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 AC092326.2-201ENST00000624772 1561 ntBASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
LSM4Q9Y4Z0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 RAD17P1-201ENST00000418130 2042 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AC116667.1-201ENST00000604855 2072 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AC021146.4-201ENST00000309229 279 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 DEFB108F-201ENST00000344638 222 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 RNA5SP388-201ENST00000362584 119 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 RNA5SP515-201ENST00000364570 118 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 SNORA57.1-201ENST00000391227 145 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 RNU2-71P-201ENST00000411395 189 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 MTND3P17-201ENST00000416968 344 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 ZNF885P-201ENST00000420174 1098 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 USP9YP36-201ENST00000424581 829 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.49□□□□□ -1.85
LSM4Q9Y4Z0 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms