Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AC103710.4-201ENST00000609301 899 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 AC007014.2-201ENST00000615581 479 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 AC138649.3-201ENST00000622154 254 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 AL157786.1-207ENST00000627771 695 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.7□□□□□ -1.66
USP25Q9UHP3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.7□□□□□ -1.66
USP25Q9UHP3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP25Q9UHP3 AL049780.3-201ENST00000624612 1583 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP25Q9UHP3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP25Q9UHP3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP25Q9UHP3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP25Q9UHP3 MIR1305-201ENST00000408300 86 ntBASIC4.69□□□□□ -1.66
USP25Q9UHP3 ELOCP19-201ENST00000411919 318 ntBASIC4.69□□□□□ -1.66
USP25Q9UHP3 AC092447.6-201ENST00000414578 210 ntBASIC4.69□□□□□ -1.66
USP25Q9UHP3 COX6CP17-201ENST00000421389 185 ntBASIC4.69□□□□□ -1.66
USP25Q9UHP3 MTCO2P19-201ENST00000427513 598 ntBASIC4.69□□□□□ -1.66
USP25Q9UHP3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.69□□□□□ -1.66
USP25Q9UHP3 AC087650.1-201ENST00000431445 468 ntBASIC4.69□□□□□ -1.66
USP25Q9UHP3 AL121601.2-201ENST00000438019 707 ntBASIC4.69□□□□□ -1.66
USP25Q9UHP3 LSM1P1-201ENST00000438629 273 ntBASIC4.69□□□□□ -1.66
USP25Q9UHP3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.69□□□□□ -1.66
USP25Q9UHP3 AL353691.1-201ENST00000451332 387 ntBASIC4.69□□□□□ -1.66
USP25Q9UHP3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.69□□□□□ -1.66
USP25Q9UHP3 RNA5SP246-201ENST00000458909 119 ntBASIC4.69□□□□□ -1.66
USP25Q9UHP3 AL121769.1-201ENST00000469473 401 ntBASIC4.69□□□□□ -1.66
USP25Q9UHP3 AC106872.2-201ENST00000494303 480 ntBASIC4.69□□□□□ -1.66
USP25Q9UHP3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.69□□□□□ -1.66
USP25Q9UHP3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.69□□□□□ -1.66
USP25Q9UHP3 BTF3L4P4-201ENST00000506381 449 ntBASIC4.69□□□□□ -1.66
USP25Q9UHP3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.69□□□□□ -1.66
USP25Q9UHP3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.69□□□□□ -1.66
USP25Q9UHP3 RNU6-314P-201ENST00000516574 104 ntBASIC4.69□□□□□ -1.66
USP25Q9UHP3 RNU6-430P-201ENST00000517078 107 ntBASIC4.69□□□□□ -1.66
USP25Q9UHP3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.69□□□□□ -1.66
USP25Q9UHP3 AL121603.1-201ENST00000553815 142 ntBASIC4.69□□□□□ -1.66
USP25Q9UHP3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
USP25Q9UHP3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.69□□□□□ -1.66
USP25Q9UHP3 AL161729.4-201ENST00000604650 476 ntBASIC4.69□□□□□ -1.66
USP25Q9UHP3 AL365503.1-201ENST00000605247 905 ntBASIC4.69□□□□□ -1.66
USP25Q9UHP3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.69□□□□□ -1.66
USP25Q9UHP3 AC097468.3-201ENST00000607956 456 ntBASIC4.69□□□□□ -1.66
USP25Q9UHP3 AC025253.1-201ENST00000613623 543 ntBASIC4.69□□□□□ -1.66
USP25Q9UHP3 AC136475.10-201ENST00000620253 385 ntBASIC4.69□□□□□ -1.66
USP25Q9UHP3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.69□□□□□ -1.66
USP25Q9UHP3 AC138649.5-201ENST00000637456 137 ntBASIC4.69□□□□□ -1.66
USP25Q9UHP3 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.69□□□□□ -1.66
USP25Q9UHP3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP25Q9UHP3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP25Q9UHP3 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP25Q9UHP3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
USP25Q9UHP3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.68□□□□□ -1.66
USP25Q9UHP3 AC007685.1-201ENST00000329806 452 ntBASIC4.68□□□□□ -1.66
USP25Q9UHP3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
USP25Q9UHP3 RNA5SP167-201ENST00000365461 116 ntBASIC4.68□□□□□ -1.66
USP25Q9UHP3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.68□□□□□ -1.66
USP25Q9UHP3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.68□□□□□ -1.66
USP25Q9UHP3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.68□□□□□ -1.66
USP25Q9UHP3 RNU6-712P-201ENST00000410558 100 ntBASIC4.68□□□□□ -1.66
USP25Q9UHP3 AMD1P2-201ENST00000412936 992 ntBASIC4.68□□□□□ -1.66
USP25Q9UHP3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.68□□□□□ -1.66
USP25Q9UHP3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.68□□□□□ -1.66
USP25Q9UHP3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.68□□□□□ -1.66
USP25Q9UHP3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.68□□□□□ -1.66
USP25Q9UHP3 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.68□□□□□ -1.66
USP25Q9UHP3 MTATP6P30-201ENST00000443540 664 ntBASIC4.68□□□□□ -1.66
USP25Q9UHP3 PSPHP1-201ENST00000450062 261 ntBASIC4.68□□□□□ -1.66
USP25Q9UHP3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.68□□□□□ -1.66
USP25Q9UHP3 snoU13.1-201ENST00000459157 104 ntBASIC4.68□□□□□ -1.66
USP25Q9UHP3 AC022447.3-201ENST00000506865 495 ntBASIC4.68□□□□□ -1.66
USP25Q9UHP3 AC008958.1-201ENST00000511047 682 ntBASIC4.68□□□□□ -1.66
USP25Q9UHP3 AF131216.2-201ENST00000512316 564 ntBASIC4.68□□□□□ -1.66
USP25Q9UHP3 AC034159.1-201ENST00000513885 583 ntBASIC4.68□□□□□ -1.66
USP25Q9UHP3 AC010342.1-201ENST00000514047 877 ntBASIC4.68□□□□□ -1.66
USP25Q9UHP3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.68□□□□□ -1.66
USP25Q9UHP3 RNA5SP519-201ENST00000516480 119 ntBASIC4.68□□□□□ -1.66
USP25Q9UHP3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.68□□□□□ -1.66
USP25Q9UHP3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP25Q9UHP3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.68□□□□□ -1.66
USP25Q9UHP3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.68□□□□□ -1.66
USP25Q9UHP3 MIR3913-1-201ENST00000577744 102 ntBASIC4.68□□□□□ -1.66
USP25Q9UHP3 MIR544B-201ENST00000582372 78 ntBASIC4.68□□□□□ -1.66
USP25Q9UHP3 AC104662.1-201ENST00000604448 511 ntBASIC4.68□□□□□ -1.66
USP25Q9UHP3 BCRP9-201ENST00000605312 388 ntBASIC4.68□□□□□ -1.66
USP25Q9UHP3 AC008250.2-201ENST00000615261 205 ntBASIC4.68□□□□□ -1.66
USP25Q9UHP3 AP000346.3-201ENST00000622821 210 ntBASIC4.68□□□□□ -1.66
USP25Q9UHP3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.68□□□□□ -1.66
USP25Q9UHP3 AC124864.2-201ENST00000624736 186 ntBASIC4.68□□□□□ -1.66
USP25Q9UHP3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.68□□□□□ -1.66
USP25Q9UHP3 AL157700.1-201ENST00000561973 1432 ntBASIC4.68□□□□□ -1.66
USP25Q9UHP3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP25Q9UHP3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.68□□□□□ -1.66
USP25Q9UHP3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
USP25Q9UHP3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
USP25Q9UHP3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USP25Q9UHP3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USP25Q9UHP3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USP25Q9UHP3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
USP25Q9UHP3 CR848007.1-201ENST00000442354 1699 ntBASIC4.67□□□□□ -1.66
USP25Q9UHP3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms