Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC3.17□□□□□ -1.9
RIMBP3Q9UFD9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
RIMBP3Q9UFD9 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RIMBP3Q9UFD9 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RIMBP3Q9UFD9 FAM35CP-201ENST00000554755 2470 ntBASIC3.16□□□□□ -1.9
RIMBP3Q9UFD9 AL355578.1-201ENST00000607405 1328 ntBASIC3.16□□□□□ -1.9
RIMBP3Q9UFD9 AC011155.1-201ENST00000316512 456 ntBASIC3.16□□□□□ -1.9
RIMBP3Q9UFD9 Y_RNA.36-201ENST00000362602 112 ntBASIC3.16□□□□□ -1.9
RIMBP3Q9UFD9 AC099336.2-201ENST00000422457 254 ntBASIC3.16□□□□□ -1.9
RIMBP3Q9UFD9 RPS27P27-201ENST00000498779 255 ntBASIC3.16□□□□□ -1.9
RIMBP3Q9UFD9 AC087441.2-201ENST00000529141 262 ntBASIC3.16□□□□□ -1.9
RIMBP3Q9UFD9 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.16□□□□□ -1.9
RIMBP3Q9UFD9 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.16□□□□□ -1.9
RIMBP3Q9UFD9 AC098848.2-201ENST00000588023 330 ntBASIC3.16□□□□□ -1.9
RIMBP3Q9UFD9 AC092650.2-201ENST00000619984 902 ntBASIC3.16□□□□□ -1.9
RIMBP3Q9UFD9 MIR3199-2-201ENST00000636243 86 ntBASIC3.16□□□□□ -1.9
RIMBP3Q9UFD9 AC009452.1-201ENST00000640823 606 ntBASIC3.16□□□□□ -1.9
RIMBP3Q9UFD9 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RIMBP3Q9UFD9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.16□□□□□ -1.9
RIMBP3Q9UFD9 AC092326.2-201ENST00000624772 1561 ntBASIC3.16□□□□□ -1.9
RIMBP3Q9UFD9 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RIMBP3Q9UFD9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
RIMBP3Q9UFD9 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
RIMBP3Q9UFD9 SNORD21-201ENST00000383953 95 ntBASIC3.15□□□□□ -1.9
RIMBP3Q9UFD9 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.15□□□□□ -1.9
RIMBP3Q9UFD9 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.15□□□□□ -1.9
RIMBP3Q9UFD9 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RIMBP3Q9UFD9 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RIMBP3Q9UFD9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RIMBP3Q9UFD9 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
RIMBP3Q9UFD9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RIMBP3Q9UFD9 Y_RNA.205-201ENST00000364128 113 ntBASIC3.15□□□□□ -1.91
RIMBP3Q9UFD9 NDUFB4P5-201ENST00000415445 361 ntBASIC3.15□□□□□ -1.91
RIMBP3Q9UFD9 AL353597.2-202ENST00000434901 373 ntBASIC3.15□□□□□ -1.91
RIMBP3Q9UFD9 RAB9AP5-201ENST00000437794 597 ntBASIC3.15□□□□□ -1.91
RIMBP3Q9UFD9 RAB9AP2-201ENST00000443911 597 ntBASIC3.15□□□□□ -1.91
RIMBP3Q9UFD9 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.15□□□□□ -1.91
RIMBP3Q9UFD9 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.15□□□□□ -1.91
RIMBP3Q9UFD9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.15□□□□□ -1.91
RIMBP3Q9UFD9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.15□□□□□ -1.91
RIMBP3Q9UFD9 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
RIMBP3Q9UFD9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.15□□□□□ -1.91
RIMBP3Q9UFD9 AL645944.1-201ENST00000603857 493 ntBASIC3.15□□□□□ -1.91
RIMBP3Q9UFD9 AL713998.2-201ENST00000604538 1198 ntBASIC3.15□□□□□ -1.91
RIMBP3Q9UFD9 AL139811.1-201ENST00000424779 2299 ntBASIC3.14□□□□□ -1.91
RIMBP3Q9UFD9 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RIMBP3Q9UFD9 AC121333.1-201ENST00000567488 2709 ntBASIC3.14□□□□□ -1.91
RIMBP3Q9UFD9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RIMBP3Q9UFD9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RIMBP3Q9UFD9 RNU6-1331P-201ENST00000363658 106 ntBASIC3.14□□□□□ -1.91
RIMBP3Q9UFD9 SNORA51.4-201ENST00000364993 124 ntBASIC3.14□□□□□ -1.91
RIMBP3Q9UFD9 RNA5SP105-201ENST00000391123 113 ntBASIC3.14□□□□□ -1.91
RIMBP3Q9UFD9 AC098592.2-201ENST00000413158 265 ntBASIC3.14□□□□□ -1.91
RIMBP3Q9UFD9 AC022022.1-201ENST00000430304 178 ntBASIC3.14□□□□□ -1.91
RIMBP3Q9UFD9 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.14□□□□□ -1.91
RIMBP3Q9UFD9 CLIC4P1-201ENST00000453177 535 ntBASIC3.14□□□□□ -1.91
RIMBP3Q9UFD9 AC004263.1-201ENST00000479327 332 ntBASIC3.14□□□□□ -1.91
RIMBP3Q9UFD9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.14□□□□□ -1.91
RIMBP3Q9UFD9 NDUFB4P9-201ENST00000511646 388 ntBASIC3.14□□□□□ -1.91
RIMBP3Q9UFD9 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC3.14□□□□□ -1.91
RIMBP3Q9UFD9 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.14□□□□□ -1.91
RIMBP3Q9UFD9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.14□□□□□ -1.91
RIMBP3Q9UFD9 AL035411.2-201ENST00000604022 421 ntBASIC3.14□□□□□ -1.91
RIMBP3Q9UFD9 AC116447.1-201ENST00000613153 453 ntBASIC3.14□□□□□ -1.91
RIMBP3Q9UFD9 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.14□□□□□ -1.91
RIMBP3Q9UFD9 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.14□□□□□ -1.91
RIMBP3Q9UFD9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RIMBP3Q9UFD9 XIAPP3-201ENST00000312918 795 ntBASIC3.13□□□□□ -1.91
RIMBP3Q9UFD9 AC013404.1-201ENST00000413068 249 ntBASIC3.13□□□□□ -1.91
RIMBP3Q9UFD9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.13□□□□□ -1.91
RIMBP3Q9UFD9 MTND2P2-201ENST00000434633 945 ntBASIC3.13□□□□□ -1.91
RIMBP3Q9UFD9 AL513321.1-201ENST00000441175 761 ntBASIC3.13□□□□□ -1.91
RIMBP3Q9UFD9 RPL23AP55-201ENST00000498163 452 ntBASIC3.13□□□□□ -1.91
RIMBP3Q9UFD9 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.13□□□□□ -1.91
RIMBP3Q9UFD9 AC005951.1-201ENST00000576706 485 ntBASIC3.13□□□□□ -1.91
RIMBP3Q9UFD9 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.13□□□□□ -1.91
RIMBP3Q9UFD9 AL512598.1-201ENST00000610158 273 ntBASIC3.13□□□□□ -1.91
RIMBP3Q9UFD9 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.13□□□□□ -1.91
RIMBP3Q9UFD9 OR4G1P-203ENST00000641984 1631 ntBASIC3.13□□□□□ -1.91
RIMBP3Q9UFD9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.12□□□□□ -1.91
RIMBP3Q9UFD9 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.12□□□□□ -1.91
RIMBP3Q9UFD9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.12□□□□□ -1.91
RIMBP3Q9UFD9 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RIMBP3Q9UFD9 AL354719.1-201ENST00000406535 843 ntBASIC3.12□□□□□ -1.91
RIMBP3Q9UFD9 AIMP1P1-201ENST00000418670 937 ntBASIC3.12□□□□□ -1.91
RIMBP3Q9UFD9 AL390023.1-201ENST00000428836 262 ntBASIC3.12□□□□□ -1.91
RIMBP3Q9UFD9 MTCYBP31-201ENST00000438855 1122 ntBASIC3.12□□□□□ -1.91
RIMBP3Q9UFD9 HSPE1P28-201ENST00000443139 211 ntBASIC3.12□□□□□ -1.91
RIMBP3Q9UFD9 GAPDHP27-201ENST00000447427 1020 ntBASIC3.12□□□□□ -1.91
RIMBP3Q9UFD9 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.12□□□□□ -1.91
RIMBP3Q9UFD9 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC3.12□□□□□ -1.91
RIMBP3Q9UFD9 VN1R81P-201ENST00000602085 372 ntBASIC3.12□□□□□ -1.91
RIMBP3Q9UFD9 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
RIMBP3Q9UFD9 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RIMBP3Q9UFD9 AC103988.1-201ENST00000566382 2177 ntBASIC3.12□□□□□ -1.91
RIMBP3Q9UFD9 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RIMBP3Q9UFD9 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.12□□□□□ -1.91
RIMBP3Q9UFD9 RNU6-328P-201ENST00000390887 106 ntBASIC3.11□□□□□ -1.91
RIMBP3Q9UFD9 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.11□□□□□ -1.91
RIMBP3Q9UFD9 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms