Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.55□□□□□ -2
VAPAQ9P0L0 GXYLT1P1-201ENST00000446657 490 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 VN1R34P-201ENST00000447387 883 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 AL050341.1-201ENST00000447743 313 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.55□□□□□ -2
VAPAQ9P0L0 MTND2P30-201ENST00000456663 382 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 BX510359.1-201ENST00000456973 237 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.55□□□□□ -2
VAPAQ9P0L0 RNU7-140P-201ENST00000459546 60 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 AC118282.2-201ENST00000508739 374 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 AC006445.2-201ENST00000510061 472 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 MTND5P4-201ENST00000514978 288 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.55□□□□□ -2
VAPAQ9P0L0 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.55□□□□□ -2
VAPAQ9P0L0 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.55□□□□□ -2
VAPAQ9P0L0 AL731537.2-201ENST00000561565 951 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 LINC00557-201ENST00000563184 1279 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.55□□□□□ -2
VAPAQ9P0L0 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.55□□□□□ -2
VAPAQ9P0L0 AC012443.1-201ENST00000605605 231 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 BX664608.1-201ENST00000610519 487 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.55□□□□□ -2
VAPAQ9P0L0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.54□□□□□ -2
VAPAQ9P0L0 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
VAPAQ9P0L0 AC138915.1-201ENST00000565427 1685 ntBASIC2.54□□□□□ -2
VAPAQ9P0L0 RNU6-251P-201ENST00000363235 104 ntBASIC2.54□□□□□ -2
VAPAQ9P0L0 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
VAPAQ9P0L0 SNORD51-201ENST00000384320 80 ntBASIC2.54□□□□□ -2
VAPAQ9P0L0 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.54□□□□□ -2
VAPAQ9P0L0 TMSB4XP8-201ENST00000402089 135 ntBASIC2.54□□□□□ -2
VAPAQ9P0L0 AL138885.1-201ENST00000405921 675 ntBASIC2.54□□□□□ -2
VAPAQ9P0L0 RNU2-15P-201ENST00000410692 191 ntBASIC2.54□□□□□ -2
VAPAQ9P0L0 AL136133.1-201ENST00000413694 376 ntBASIC2.54□□□□□ -2
VAPAQ9P0L0 TMSB4XP6-201ENST00000415187 135 ntBASIC2.54□□□□□ -2
VAPAQ9P0L0 AL357078.2-201ENST00000416486 427 ntBASIC2.54□□□□□ -2
VAPAQ9P0L0 TMSB4XP1-201ENST00000424567 135 ntBASIC2.54□□□□□ -2
VAPAQ9P0L0 AL139132.1-201ENST00000431587 344 ntBASIC2.54□□□□□ -2
VAPAQ9P0L0 CACYBPP2-201ENST00000453625 678 ntBASIC2.54□□□□□ -2
VAPAQ9P0L0 AC010099.1-201ENST00000455434 375 ntBASIC2.54□□□□□ -2
VAPAQ9P0L0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.54□□□□□ -2
VAPAQ9P0L0 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.54□□□□□ -2
VAPAQ9P0L0 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.54□□□□□ -2
VAPAQ9P0L0 TBCAP3-201ENST00000512475 312 ntBASIC2.54□□□□□ -2
VAPAQ9P0L0 AC010374.2-201ENST00000512933 535 ntBASIC2.54□□□□□ -2
VAPAQ9P0L0 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.54□□□□□ -2
VAPAQ9P0L0 AP003102.1-201ENST00000525638 661 ntBASIC2.54□□□□□ -2
VAPAQ9P0L0 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.54□□□□□ -2
VAPAQ9P0L0 OR7K1P-201ENST00000546439 926 ntBASIC2.54□□□□□ -2
VAPAQ9P0L0 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.54□□□□□ -2
VAPAQ9P0L0 NBEAP1-201ENST00000554452 979 ntBASIC2.54□□□□□ -2
VAPAQ9P0L0 SULT1C2P1-202ENST00000562418 459 ntBASIC2.54□□□□□ -2
VAPAQ9P0L0 AC093519.1-201ENST00000566109 298 ntBASIC2.54□□□□□ -2
VAPAQ9P0L0 AC012493.2-201ENST00000595083 291 ntBASIC2.54□□□□□ -2
VAPAQ9P0L0 AP002826.1-201ENST00000608835 315 ntBASIC2.54□□□□□ -2
VAPAQ9P0L0 AL118508.4-201ENST00000624142 1176 ntBASIC2.54□□□□□ -2
VAPAQ9P0L0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.54□□□□□ -2
VAPAQ9P0L0 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
VAPAQ9P0L0 RNA5SP139-201ENST00000364340 117 ntBASIC2.53□□□□□ -2
VAPAQ9P0L0 SNORA18.3-201ENST00000384122 132 ntBASIC2.53□□□□□ -2
VAPAQ9P0L0 RNA5SP210-201ENST00000391034 120 ntBASIC2.53□□□□□ -2
VAPAQ9P0L0 AL355615.1-201ENST00000406187 641 ntBASIC2.53□□□□□ -2
VAPAQ9P0L0 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.53□□□□□ -2
VAPAQ9P0L0 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.53□□□□□ -2
VAPAQ9P0L0 AL592148.1-201ENST00000413568 445 ntBASIC2.53□□□□□ -2
VAPAQ9P0L0 EEF1A1P41-201ENST00000414667 207 ntBASIC2.53□□□□□ -2
VAPAQ9P0L0 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.53□□□□□ -2
VAPAQ9P0L0 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.53□□□□□ -2
VAPAQ9P0L0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.53□□□□□ -2
VAPAQ9P0L0 NDUFB4P6-201ENST00000436819 366 ntBASIC2.53□□□□□ -2
VAPAQ9P0L0 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.53□□□□□ -2
VAPAQ9P0L0 AP000705.1-201ENST00000454567 350 ntBASIC2.53□□□□□ -2
VAPAQ9P0L0 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.53□□□□□ -2
VAPAQ9P0L0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.53□□□□□ -2
VAPAQ9P0L0 SETP11-201ENST00000473027 690 ntBASIC2.53□□□□□ -2
VAPAQ9P0L0 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.53□□□□□ -2
VAPAQ9P0L0 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.53□□□□□ -2
VAPAQ9P0L0 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.53□□□□□ -2
VAPAQ9P0L0 AC009901.1-201ENST00000506703 541 ntBASIC2.53□□□□□ -2
VAPAQ9P0L0 RNA5SP135-201ENST00000517019 125 ntBASIC2.53□□□□□ -2
VAPAQ9P0L0 RN7SKP57-201ENST00000517248 293 ntBASIC2.53□□□□□ -2
VAPAQ9P0L0 AC026616.1-201ENST00000523157 525 ntBASIC2.53□□□□□ -2
VAPAQ9P0L0 AC087272.1-201ENST00000523624 533 ntBASIC2.53□□□□□ -2
VAPAQ9P0L0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.53□□□□□ -2
VAPAQ9P0L0 AC123904.3-201ENST00000547218 814 ntBASIC2.53□□□□□ -2
VAPAQ9P0L0 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.53□□□□□ -2
VAPAQ9P0L0 AC008127.2-201ENST00000549925 1075 ntBASIC2.53□□□□□ -2
VAPAQ9P0L0 AC007954.1-201ENST00000554198 494 ntBASIC2.53□□□□□ -2
VAPAQ9P0L0 MIR4635-201ENST00000583759 79 ntBASIC2.53□□□□□ -2
VAPAQ9P0L0 AC012467.1-201ENST00000607740 256 ntBASIC2.53□□□□□ -2
VAPAQ9P0L0 AC020658.4-201ENST00000613987 684 ntBASIC2.53□□□□□ -2
VAPAQ9P0L0 AC084757.4-201ENST00000616350 526 ntBASIC2.53□□□□□ -2
VAPAQ9P0L0 AC079228.1-201ENST00000624774 1049 ntBASIC2.53□□□□□ -2
VAPAQ9P0L0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.53□□□□□ -2
VAPAQ9P0L0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
VAPAQ9P0L0 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.52□□□□□ -2.01
VAPAQ9P0L0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
VAPAQ9P0L0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VAPAQ9P0L0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms