Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4□□□□□ -1.77
NCKIPSDQ9NZQ3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4□□□□□ -1.77
NCKIPSDQ9NZQ3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NCKIPSDQ9NZQ3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4□□□□□ -1.77
NCKIPSDQ9NZQ3 AC106871.1-201ENST00000568324 3102 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 RNU6-28P-201ENST00000362378 107 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 RNU6-989P-201ENST00000362756 107 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 RNU6-837P-201ENST00000391056 108 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 U3.29-201ENST00000391296 212 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 RHEBP3-201ENST00000411920 351 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 RPL17P12-201ENST00000413391 526 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 RPS27AP14-201ENST00000422868 454 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 AC018644.1-201ENST00000429934 551 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 AL358472.1-201ENST00000431295 329 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 MTND5P14-201ENST00000441481 1267 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 AC002381.1-201ENST00000447049 280 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 MTCO1P27-201ENST00000448269 226 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 HMGB1P15-201ENST00000453854 435 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 AC024589.1-201ENST00000512207 263 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 RNU6-27P-201ENST00000516146 107 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 AC025881.1-201ENST00000518851 512 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 AC022968.1-201ENST00000567372 442 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 MIR4444-1-201ENST00000581696 74 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 MIR4444-2-201ENST00000584390 74 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 AL592436.1-201ENST00000605135 558 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 HMGN2P28-201ENST00000606102 262 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 AC098614.4-201ENST00000607601 462 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 AC027807.2-201ENST00000616099 408 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 AC104010.1-201ENST00000616889 150 ntBASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
NCKIPSDQ9NZQ3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 RNU5F-7P-201ENST00000363696 115 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 AL590704.1-201ENST00000402856 794 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 RNU6-248P-201ENST00000410720 107 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 RPS6P12-201ENST00000432491 726 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 SDCBPP1-201ENST00000440192 890 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 AL133547.1-201ENST00000448546 220 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 AC034236.1-201ENST00000469891 373 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 RPL31P50-201ENST00000471002 296 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 AC023424.2-201ENST00000493479 777 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 AC006390.1-201ENST00000508068 283 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 AC093809.1-201ENST00000509155 340 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 AC116347.2-201ENST00000514912 523 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 AC093853.1-201ENST00000515689 483 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 AP003392.2-201ENST00000527269 208 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 AC013828.2-201ENST00000532487 235 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 CYCSP30-201ENST00000546447 172 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 AC091516.1-201ENST00000549191 703 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 MIR5684-201ENST00000585074 65 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 AC005771.1-201ENST00000585581 349 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 SEPT7P9-203ENST00000604116 343 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 MIR486-1-201ENST00000612171 68 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 AC138932.5-201ENST00000617759 563 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 AL354798.1-201ENST00000622505 329 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 AC095031.1-201ENST00000623685 672 ntBASIC3.98□□□□□ -1.77
NCKIPSDQ9NZQ3 AC019226.1-201ENST00000625666 515 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms