Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 HSPE1P6-201ENST00000479457 291 ntBASIC3.21□□□□□ -1.9
HPF1Q9NWY4 HMGB1P28-201ENST00000507778 552 ntBASIC3.21□□□□□ -1.9
HPF1Q9NWY4 AC007458.1-201ENST00000542812 373 ntBASIC3.21□□□□□ -1.9
HPF1Q9NWY4 NCAPGP2-201ENST00000557911 754 ntBASIC3.21□□□□□ -1.9
HPF1Q9NWY4 TGIF1P1-201ENST00000558095 802 ntBASIC3.21□□□□□ -1.9
HPF1Q9NWY4 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.21□□□□□ -1.9
HPF1Q9NWY4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.21□□□□□ -1.9
HPF1Q9NWY4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.21□□□□□ -1.9
HPF1Q9NWY4 AC011451.2-201ENST00000604303 598 ntBASIC3.21□□□□□ -1.9
HPF1Q9NWY4 AC069304.2-201ENST00000605154 435 ntBASIC3.21□□□□□ -1.9
HPF1Q9NWY4 AL590099.1-201ENST00000615276 138 ntBASIC3.21□□□□□ -1.9
HPF1Q9NWY4 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.21□□□□□ -1.9
HPF1Q9NWY4 MIR7975-201ENST00000619350 68 ntBASIC3.21□□□□□ -1.9
HPF1Q9NWY4 MIR6130-201ENST00000619419 109 ntBASIC3.21□□□□□ -1.9
HPF1Q9NWY4 AC073308.1-201ENST00000623696 305 ntBASIC3.21□□□□□ -1.9
HPF1Q9NWY4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.21□□□□□ -1.9
HPF1Q9NWY4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
HPF1Q9NWY4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
HPF1Q9NWY4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.21□□□□□ -1.9
HPF1Q9NWY4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.21□□□□□ -1.9
HPF1Q9NWY4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.2□□□□□ -1.9
HPF1Q9NWY4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HPF1Q9NWY4 Z83843.1-201ENST00000604070 3685 ntBASIC3.2□□□□□ -1.9
HPF1Q9NWY4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.2□□□□□ -1.9
HPF1Q9NWY4 RNA5SP42-201ENST00000364278 115 ntBASIC3.2□□□□□ -1.9
HPF1Q9NWY4 RNU6-805P-201ENST00000365643 106 ntBASIC3.2□□□□□ -1.9
HPF1Q9NWY4 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HPF1Q9NWY4 DYNLT3P1-201ENST00000378574 347 ntBASIC3.2□□□□□ -1.9
HPF1Q9NWY4 MIR490-201ENST00000384865 128 ntBASIC3.2□□□□□ -1.9
HPF1Q9NWY4 HMGB1P17-201ENST00000403495 628 ntBASIC3.2□□□□□ -1.9
HPF1Q9NWY4 RPL7P44-201ENST00000424827 742 ntBASIC3.2□□□□□ -1.9
HPF1Q9NWY4 AC011242.1-201ENST00000433596 1158 ntBASIC3.2□□□□□ -1.9
HPF1Q9NWY4 AC129850.1-201ENST00000436203 508 ntBASIC3.2□□□□□ -1.9
HPF1Q9NWY4 ARPC3P1-201ENST00000437218 533 ntBASIC3.2□□□□□ -1.9
HPF1Q9NWY4 Z96811.1-201ENST00000445880 108 ntBASIC3.2□□□□□ -1.9
HPF1Q9NWY4 RPL26P28-201ENST00000451325 435 ntBASIC3.2□□□□□ -1.9
HPF1Q9NWY4 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.2□□□□□ -1.9
HPF1Q9NWY4 MTND4LP3-201ENST00000468320 276 ntBASIC3.2□□□□□ -1.9
HPF1Q9NWY4 AC079203.1-201ENST00000487972 404 ntBASIC3.2□□□□□ -1.9
HPF1Q9NWY4 AL049874.1-201ENST00000489560 388 ntBASIC3.2□□□□□ -1.9
HPF1Q9NWY4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.2□□□□□ -1.9
HPF1Q9NWY4 AC074250.1-201ENST00000511117 192 ntBASIC3.2□□□□□ -1.9
HPF1Q9NWY4 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.2□□□□□ -1.9
HPF1Q9NWY4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.2□□□□□ -1.9
HPF1Q9NWY4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.2□□□□□ -1.9
HPF1Q9NWY4 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.2□□□□□ -1.9
HPF1Q9NWY4 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.2□□□□□ -1.9
HPF1Q9NWY4 HMGB1P6-201ENST00000569046 646 ntBASIC3.2□□□□□ -1.9
HPF1Q9NWY4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.2□□□□□ -1.9
HPF1Q9NWY4 AP001429.1-201ENST00000602568 530 ntBASIC3.2□□□□□ -1.9
HPF1Q9NWY4 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.2□□□□□ -1.9
HPF1Q9NWY4 AL390208.1-201ENST00000605885 644 ntBASIC3.2□□□□□ -1.9
HPF1Q9NWY4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.2□□□□□ -1.9
HPF1Q9NWY4 AC008443.7-201ENST00000622195 246 ntBASIC3.2□□□□□ -1.9
HPF1Q9NWY4 AC138915.1-201ENST00000565427 1685 ntBASIC3.2□□□□□ -1.9
HPF1Q9NWY4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HPF1Q9NWY4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
HPF1Q9NWY4 AC010680.1-201ENST00000590024 3590 ntBASIC3.2□□□□□ -1.9
HPF1Q9NWY4 AC109315.1-201ENST00000584143 1347 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HPF1Q9NWY4 MFSD8-233ENST00000641482 4860 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.19□□□□□ -1.9
HPF1Q9NWY4 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HPF1Q9NWY4 RPL23AP57-201ENST00000332361 466 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 snoZ40.1-201ENST00000364540 72 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 SNORD17-201ENST00000390930 237 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 RNA5SP293-201ENST00000410527 113 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 RPS7P13-201ENST00000413955 498 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.19□□□□□ -1.9
HPF1Q9NWY4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.19□□□□□ -1.9
HPF1Q9NWY4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.19□□□□□ -1.9
HPF1Q9NWY4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.19□□□□□ -1.9
HPF1Q9NWY4 NDUFB4P7-201ENST00000423198 363 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 AC097713.2-201ENST00000430199 356 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 AC005019.1-201ENST00000436455 431 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.19□□□□□ -1.9
HPF1Q9NWY4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HPF1Q9NWY4 AC104978.1-201ENST00000449387 391 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.19□□□□□ -1.9
HPF1Q9NWY4 snoU13.22-201ENST00000459428 104 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.19□□□□□ -1.9
HPF1Q9NWY4 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.19□□□□□ -1.9
HPF1Q9NWY4 RN7SKP31-201ENST00000516354 278 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 RNU6-528P-201ENST00000516926 100 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 RNA5SP380-201ENST00000517190 98 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.19□□□□□ -1.9
HPF1Q9NWY4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.19□□□□□ -1.9
HPF1Q9NWY4 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HPF1Q9NWY4 AC125611.2-201ENST00000551907 647 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.19□□□□□ -1.9
HPF1Q9NWY4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.19□□□□□ -1.9
HPF1Q9NWY4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.19□□□□□ -1.9
HPF1Q9NWY4 AMZ2P1-203ENST00000565833 850 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 AC008739.2-201ENST00000597006 317 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 AC091057.2-201ENST00000602594 792 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 AC112220.2-201ENST00000605513 533 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 AC004067.1-201ENST00000608733 700 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 AC024257.5-201ENST00000612739 531 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 AC023158.2-201ENST00000614876 543 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms