Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.91□□□□□ -1.78
BLOC1S4Q9NUP1 RNU2-27P-201ENST00000516185 142 ntBASIC3.91□□□□□ -1.78
BLOC1S4Q9NUP1 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.91□□□□□ -1.78
BLOC1S4Q9NUP1 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.91□□□□□ -1.78
BLOC1S4Q9NUP1 AC090888.2-201ENST00000559765 1144 ntBASIC3.91□□□□□ -1.78
BLOC1S4Q9NUP1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.91□□□□□ -1.78
BLOC1S4Q9NUP1 AC009101.1-201ENST00000568135 242 ntBASIC3.91□□□□□ -1.78
BLOC1S4Q9NUP1 AC006116.10-201ENST00000591836 581 ntBASIC3.91□□□□□ -1.78
BLOC1S4Q9NUP1 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.91□□□□□ -1.78
BLOC1S4Q9NUP1 AC006539.2-201ENST00000601729 572 ntBASIC3.91□□□□□ -1.78
BLOC1S4Q9NUP1 AL109653.1-201ENST00000603091 248 ntBASIC3.91□□□□□ -1.78
BLOC1S4Q9NUP1 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.91□□□□□ -1.78
BLOC1S4Q9NUP1 AL450472.3-201ENST00000615578 367 ntBASIC3.91□□□□□ -1.78
BLOC1S4Q9NUP1 AC009464.1-201ENST00000615731 469 ntBASIC3.91□□□□□ -1.78
BLOC1S4Q9NUP1 AL391261.4-201ENST00000616012 481 ntBASIC3.91□□□□□ -1.78
BLOC1S4Q9NUP1 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
BLOC1S4Q9NUP1 AL034408.1-202ENST00000636088 415 ntBASIC3.91□□□□□ -1.78
BLOC1S4Q9NUP1 AC244258.1-201ENST00000637553 1071 ntBASIC3.91□□□□□ -1.78
BLOC1S4Q9NUP1 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
BLOC1S4Q9NUP1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
BLOC1S4Q9NUP1 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
BLOC1S4Q9NUP1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
BLOC1S4Q9NUP1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.91□□□□□ -1.78
BLOC1S4Q9NUP1 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.91□□□□□ -1.78
BLOC1S4Q9NUP1 AP000526.1-201ENST00000603308 1388 ntBASIC3.9□□□□□ -1.78
BLOC1S4Q9NUP1 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.9□□□□□ -1.78
BLOC1S4Q9NUP1 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
BLOC1S4Q9NUP1 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
BLOC1S4Q9NUP1 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.78
BLOC1S4Q9NUP1 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.9□□□□□ -1.78
BLOC1S4Q9NUP1 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 RPL21P132-201ENST00000331267 462 ntBASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 RNA5SP88-201ENST00000365560 109 ntBASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 FAT1P1-201ENST00000406588 507 ntBASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 MIR1305-201ENST00000408300 86 ntBASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 RPL17P36-201ENST00000420302 549 ntBASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 UBE2FP3-201ENST00000436366 524 ntBASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 CDC27P1-201ENST00000445384 715 ntBASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 RBMY2UP-201ENST00000453474 324 ntBASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 AC104308.1-201ENST00000454621 333 ntBASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 AC023598.1-201ENST00000472521 361 ntBASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 AC022447.3-201ENST00000506865 495 ntBASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 AC026784.1-201ENST00000507986 352 ntBASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 AC034159.1-201ENST00000513885 583 ntBASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 SNORA70.16-201ENST00000516390 95 ntBASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 RN7SKP287-201ENST00000516546 266 ntBASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 PAICSP4-201ENST00000517543 1253 ntBASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 AC026403.1-201ENST00000518938 295 ntBASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 AC022690.1-201ENST00000526681 550 ntBASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 AC105224.1-201ENST00000587055 421 ntBASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 AC093424.1-201ENST00000604999 338 ntBASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 AC021755.4-201ENST00000616620 456 ntBASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 AC068831.7-201ENST00000616954 363 ntBASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 PCMTD1P7-201ENST00000634506 357 ntBASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 MFSD8-233ENST00000641482 4860 ntBASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.9□□□□□ -1.79
BLOC1S4Q9NUP1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 AC008568.2-201ENST00000623862 2313 ntBASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 SDAD1P2-201ENST00000441308 2028 ntBASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 AL672167.1-206ENST00000356293 943 ntBASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 Y_RNA.18-201ENST00000362461 102 ntBASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 AL359837.1-201ENST00000381357 287 ntBASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 RNU6-637P-201ENST00000384050 107 ntBASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 RNU6-76P-201ENST00000384060 104 ntBASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 U3.20-201ENST00000390909 217 ntBASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 TMEM167AP1-201ENST00000423409 219 ntBASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 AL356867.1-201ENST00000429623 299 ntBASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 AC091286.1-201ENST00000431233 461 ntBASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 GOT2P5-201ENST00000433995 546 ntBASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 AC090774.1-201ENST00000435925 246 ntBASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 RPL7P28-201ENST00000437739 740 ntBASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 RPL17P49-201ENST00000443728 411 ntBASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 MRPS31P2-201ENST00000451581 518 ntBASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 RPS4XP2-201ENST00000458402 793 ntBASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 AC012181.1-201ENST00000479895 423 ntBASIC3.89□□□□□ -1.79
BLOC1S4Q9NUP1 POU5F1P7-201ENST00000508759 541 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms