Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATG3Q9NT62 AL445437.1-201ENST00000623157 3087 ntBASIC5.76□□□□□ -1.49
ATG3Q9NT62 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG3Q9NT62 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATG3Q9NT62 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.76□□□□□ -1.49
ATG3Q9NT62 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.75□□□□□ -1.49
ATG3Q9NT62 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG3Q9NT62 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.75□□□□□ -1.49
ATG3Q9NT62 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.75□□□□□ -1.49
ATG3Q9NT62 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG3Q9NT62 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATG3Q9NT62 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
ATG3Q9NT62 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
ATG3Q9NT62 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
ATG3Q9NT62 RN7SKP44-201ENST00000363602 316 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 RNU1-85P-201ENST00000364127 164 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 AL359837.1-201ENST00000381357 287 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 RNU6-831P-201ENST00000384548 107 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 MT-TG-201ENST00000387429 68 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 RPL23AP32-201ENST00000395315 459 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 MIR1302-3-201ENST00000408128 138 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 RNU2-9P-201ENST00000410194 145 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 RN7SKP266-201ENST00000410232 287 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 RNU6-1304P-201ENST00000411374 106 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 RNU2-6P-201ENST00000411404 190 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.75□□□□□ -1.49
ATG3Q9NT62 AC009161.1-201ENST00000417306 376 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 RPL23AP38-201ENST00000423801 469 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 AC009965.2-201ENST00000425328 970 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.75□□□□□ -1.49
ATG3Q9NT62 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.75□□□□□ -1.49
ATG3Q9NT62 AC092809.1-201ENST00000441469 474 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 RPL32P28-201ENST00000443577 397 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 PPP1R2P5-201ENST00000457256 603 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.75□□□□□ -1.49
ATG3Q9NT62 AC015724.1-201ENST00000478577 156 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.75□□□□□ -1.49
ATG3Q9NT62 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATG3Q9NT62 MTCO2P24-201ENST00000515611 426 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.75□□□□□ -1.49
ATG3Q9NT62 AC063950.1-201ENST00000552036 308 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.75□□□□□ -1.49
ATG3Q9NT62 AC079587.1-201ENST00000603846 277 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 AP001521.1-201ENST00000609150 300 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 AC078899.5-201ENST00000612475 178 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 MIR8059-201ENST00000620427 81 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 uc_338.22-201ENST00000622722 187 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 CR392039.4-201ENST00000624968 501 ntBASIC5.75□□□□□ -1.49
ATG3Q9NT62 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATG3Q9NT62 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
ATG3Q9NT62 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATG3Q9NT62 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG3Q9NT62 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
ATG3Q9NT62 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
ATG3Q9NT62 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.74□□□□□ -1.49
ATG3Q9NT62 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG3Q9NT62 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ATG3Q9NT62 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
ATG3Q9NT62 RNU5E-1-201ENST00000362477 120 ntBASIC5.74□□□□□ -1.49
ATG3Q9NT62 RNU6-1120P-201ENST00000362988 108 ntBASIC5.74□□□□□ -1.49
ATG3Q9NT62 RNU4-44P-201ENST00000363050 141 ntBASIC5.74□□□□□ -1.49
ATG3Q9NT62 RNA5SP283-201ENST00000365604 119 ntBASIC5.74□□□□□ -1.49
ATG3Q9NT62 MIR3065-201ENST00000390137 79 ntBASIC5.74□□□□□ -1.49
ATG3Q9NT62 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ATG3Q9NT62 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ATG3Q9NT62 AC073264.1-201ENST00000411508 416 ntBASIC5.74□□□□□ -1.49
ATG3Q9NT62 COX6CP15-201ENST00000426313 211 ntBASIC5.74□□□□□ -1.49
ATG3Q9NT62 RPS3AP52-201ENST00000435639 297 ntBASIC5.74□□□□□ -1.49
ATG3Q9NT62 RSU1P2-202ENST00000437884 485 ntBASIC5.74□□□□□ -1.49
ATG3Q9NT62 Z95327.1-201ENST00000446082 482 ntBASIC5.74□□□□□ -1.49
ATG3Q9NT62 AC012671.1-201ENST00000451912 203 ntBASIC5.74□□□□□ -1.49
ATG3Q9NT62 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.74□□□□□ -1.49
ATG3Q9NT62 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.74□□□□□ -1.49
ATG3Q9NT62 AC008958.1-201ENST00000511047 682 ntBASIC5.74□□□□□ -1.49
ATG3Q9NT62 TTC39CP1-201ENST00000512513 755 ntBASIC5.74□□□□□ -1.49
ATG3Q9NT62 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.74□□□□□ -1.49
ATG3Q9NT62 SNORA25.17-201ENST00000517184 124 ntBASIC5.74□□□□□ -1.49
ATG3Q9NT62 COX6B1P6-201ENST00000522347 255 ntBASIC5.74□□□□□ -1.49
ATG3Q9NT62 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.74□□□□□ -1.49
ATG3Q9NT62 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.74□□□□□ -1.49
ATG3Q9NT62 AL163153.1-201ENST00000554223 283 ntBASIC5.74□□□□□ -1.49
ATG3Q9NT62 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.74□□□□□ -1.49
ATG3Q9NT62 AC245389.1-201ENST00000605141 529 ntBASIC5.74□□□□□ -1.49
ATG3Q9NT62 AC243773.3-201ENST00000613270 256 ntBASIC5.74□□□□□ -1.49
ATG3Q9NT62 AL359757.2-201ENST00000624309 274 ntBASIC5.74□□□□□ -1.49
ATG3Q9NT62 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.74□□□□□ -1.49
ATG3Q9NT62 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG3Q9NT62 OR4G1P-203ENST00000641984 1631 ntBASIC5.74□□□□□ -1.49
ATG3Q9NT62 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.74□□□□□ -1.49
ATG3Q9NT62 OR11H5P-202ENST00000641612 1325 ntBASIC5.74□□□□□ -1.49
ATG3Q9NT62 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG3Q9NT62 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ATG3Q9NT62 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.73□□□□□ -1.49
ATG3Q9NT62 AC092447.10-201ENST00000620607 1652 ntBASIC5.73□□□□□ -1.49
ATG3Q9NT62 ELL2P4-201ENST00000446870 1376 ntBASIC5.73□□□□□ -1.49
ATG3Q9NT62 RNU6-1297P-201ENST00000384415 104 ntBASIC5.73□□□□□ -1.49
ATG3Q9NT62 RNU6-1222P-201ENST00000384615 107 ntBASIC5.73□□□□□ -1.49
ATG3Q9NT62 CISD1P1-201ENST00000393907 327 ntBASIC5.73□□□□□ -1.49
ATG3Q9NT62 AL583835.1-201ENST00000399570 407 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms