Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 Z80107.1-201ENST00000436830 412 ntBASIC3.34□□□□□ -1.87
RNF41Q9H4P4 AL513043.1-201ENST00000439124 535 ntBASIC3.34□□□□□ -1.87
RNF41Q9H4P4 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.34□□□□□ -1.87
RNF41Q9H4P4 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.34□□□□□ -1.87
RNF41Q9H4P4 AC005410.1-202ENST00000460347 485 ntBASIC3.34□□□□□ -1.87
RNF41Q9H4P4 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.34□□□□□ -1.87
RNF41Q9H4P4 KLRA1P-201ENST00000503499 986 ntBASIC3.34□□□□□ -1.87
RNF41Q9H4P4 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.34□□□□□ -1.87
RNF41Q9H4P4 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.34□□□□□ -1.87
RNF41Q9H4P4 RNA5SP367-201ENST00000516557 118 ntBASIC3.34□□□□□ -1.87
RNF41Q9H4P4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.34□□□□□ -1.87
RNF41Q9H4P4 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.34□□□□□ -1.87
RNF41Q9H4P4 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.34□□□□□ -1.87
RNF41Q9H4P4 OR4A45P-201ENST00000529954 901 ntBASIC3.34□□□□□ -1.87
RNF41Q9H4P4 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.34□□□□□ -1.87
RNF41Q9H4P4 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
RNF41Q9H4P4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.34□□□□□ -1.87
RNF41Q9H4P4 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.34□□□□□ -1.87
RNF41Q9H4P4 AC090502.2-201ENST00000549267 280 ntBASIC3.34□□□□□ -1.87
RNF41Q9H4P4 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RNF41Q9H4P4 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.34□□□□□ -1.87
RNF41Q9H4P4 AGGF1P5-201ENST00000567900 919 ntBASIC3.34□□□□□ -1.87
RNF41Q9H4P4 AC138915.2-201ENST00000569776 97 ntBASIC3.34□□□□□ -1.87
RNF41Q9H4P4 LARP7P3-201ENST00000579888 337 ntBASIC3.34□□□□□ -1.87
RNF41Q9H4P4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.34□□□□□ -1.87
RNF41Q9H4P4 AL020991.1-201ENST00000612314 373 ntBASIC3.34□□□□□ -1.87
RNF41Q9H4P4 PLCE1P1-201ENST00000622094 305 ntBASIC3.34□□□□□ -1.87
RNF41Q9H4P4 AC109315.1-201ENST00000584143 1347 ntBASIC3.34□□□□□ -1.87
RNF41Q9H4P4 Z99496.1-201ENST00000469424 1477 ntBASIC3.34□□□□□ -1.88
RNF41Q9H4P4 MTCO1P24-201ENST00000515438 1558 ntBASIC3.34□□□□□ -1.88
RNF41Q9H4P4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF41Q9H4P4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
RNF41Q9H4P4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF41Q9H4P4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF41Q9H4P4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF41Q9H4P4 RNU4-92P-201ENST00000363783 136 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 RNU6-7-201ENST00000364784 107 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 RNU6-8-201ENST00000365467 107 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 RNU6-657P-201ENST00000383904 107 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 RNU6-413P-201ENST00000384115 107 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF41Q9H4P4 AL450338.1-201ENST00000407987 512 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 RPL23AP47-201ENST00000408017 460 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.33□□□□□ -1.88
RNF41Q9H4P4 AC091390.3-201ENST00000426478 338 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 SETP5-201ENST00000437270 562 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF41Q9H4P4 RPL23AP76-201ENST00000441860 458 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 RPS24P13-201ENST00000442520 397 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 AL590399.6-201ENST00000446396 307 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 AC092155.2-201ENST00000454675 477 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF41Q9H4P4 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.33□□□□□ -1.88
RNF41Q9H4P4 AC108729.1-201ENST00000487812 947 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.33□□□□□ -1.88
RNF41Q9H4P4 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.33□□□□□ -1.88
RNF41Q9H4P4 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.33□□□□□ -1.88
RNF41Q9H4P4 POU5F1P7-201ENST00000508759 541 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 RNU6-1225P-201ENST00000516336 65 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 RNU2-58P-201ENST00000516403 183 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.33□□□□□ -1.88
RNF41Q9H4P4 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.33□□□□□ -1.88
RNF41Q9H4P4 EIF4BP1-201ENST00000554881 351 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 CENPUP2-201ENST00000555897 1186 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.33□□□□□ -1.88
RNF41Q9H4P4 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.33□□□□□ -1.88
RNF41Q9H4P4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF41Q9H4P4 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.33□□□□□ -1.88
RNF41Q9H4P4 AL450336.1-201ENST00000605180 586 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 AC092954.1-201ENST00000609121 445 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 AP001521.1-201ENST00000609150 300 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 AC107075.1-201ENST00000613695 314 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 SEPT7P7-201ENST00000420492 1301 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 PABPC1P7-201ENST00000413177 1513 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
RNF41Q9H4P4 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF41Q9H4P4 AC092593.1-201ENST00000515413 1815 ntBASIC3.33□□□□□ -1.88
RNF41Q9H4P4 AL355596.1-201ENST00000565399 3996 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF41Q9H4P4 GABRG2-229ENST00000641017 3628 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 MIR26A1-201ENST00000362205 77 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 RNU6-560P-201ENST00000364007 108 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF41Q9H4P4 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF41Q9H4P4 RNU6-730P-201ENST00000383954 104 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 SNORA18.3-201ENST00000384122 132 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 SNORA51.6-201ENST00000384151 125 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 RNA5SP80-201ENST00000410475 111 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 RNU2-42P-201ENST00000410697 113 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AC068533.2-201ENST00000411872 306 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AL133384.1-201ENST00000412744 351 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 MRPS36P1-201ENST00000421291 307 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 MTCO2P17-201ENST00000424336 677 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AC087499.2-201ENST00000432861 149 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 RPL23AP16-201ENST00000441715 421 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AC004022.1-201ENST00000447766 1066 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AL034418.1-201ENST00000448675 860 ntBASIC3.32□□□□□ -1.88
RNF41Q9H4P4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms