Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AC007389.2-201ENST00000434630 306 ntBASIC2.32□□□□□ -2.04
VCX3BQ9H321 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.32□□□□□ -2.04
VCX3BQ9H321 NANOGNBP1-201ENST00000448444 480 ntBASIC2.32□□□□□ -2.04
VCX3BQ9H321 MRPS36P2-201ENST00000512569 299 ntBASIC2.32□□□□□ -2.04
VCX3BQ9H321 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.32□□□□□ -2.04
VCX3BQ9H321 CYCSP26-201ENST00000534107 320 ntBASIC2.32□□□□□ -2.04
VCX3BQ9H321 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.32□□□□□ -2.04
VCX3BQ9H321 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.32□□□□□ -2.04
VCX3BQ9H321 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.32□□□□□ -2.04
VCX3BQ9H321 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.32□□□□□ -2.04
VCX3BQ9H321 AC242628.1-201ENST00000606810 391 ntBASIC2.32□□□□□ -2.04
VCX3BQ9H321 CR392039.5-201ENST00000623201 510 ntBASIC2.32□□□□□ -2.04
VCX3BQ9H321 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.32□□□□□ -2.04
VCX3BQ9H321 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VCX3BQ9H321 KPNA2P1-201ENST00000458289 1591 ntBASIC2.32□□□□□ -2.04
VCX3BQ9H321 FAM133CP-201ENST00000332869 704 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VCX3BQ9H321 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.31□□□□□ -2.04
VCX3BQ9H321 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 Z86062.1-201ENST00000406773 777 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 SEPT2P1-201ENST00000419651 180 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 AC234781.2-201ENST00000426370 994 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 UBE2FP3-201ENST00000436366 524 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 WASF1P1-201ENST00000447560 1131 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 AC004022.1-201ENST00000447766 1066 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 MTND2P19-201ENST00000449129 1012 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 TRGVB-201ENST00000453257 471 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.31□□□□□ -2.04
VCX3BQ9H321 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.31□□□□□ -2.04
VCX3BQ9H321 snoU13.28-201ENST00000459235 104 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.31□□□□□ -2.04
VCX3BQ9H321 AC091917.2-201ENST00000505002 744 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 AC008885.2-201ENST00000509506 930 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 MTND4LP31-201ENST00000514859 294 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 RNU6-889P-201ENST00000517189 103 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.31□□□□□ -2.04
VCX3BQ9H321 AC025755.1-201ENST00000521306 278 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 TRAV11-201ENST00000539512 339 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 AC084824.1-201ENST00000550917 1005 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 HMGB1P14-201ENST00000557424 591 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.31□□□□□ -2.04
VCX3BQ9H321 AC090312.2-201ENST00000582687 378 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.31□□□□□ -2.04
VCX3BQ9H321 AC002984.1-201ENST00000591692 448 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 AC025594.3-201ENST00000613068 790 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 AC090116.1-201ENST00000615679 446 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 AL449363.1-201ENST00000617815 186 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 MIR6758-201ENST00000620653 63 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 AC026422.1-201ENST00000623961 452 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.31□□□□□ -2.04
VCX3BQ9H321 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
VCX3BQ9H321 TPTE2P4-201ENST00000258589 1605 ntBASIC2.31□□□□□ -2.04
VCX3BQ9H321 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VCX3BQ9H321 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VCX3BQ9H321 MIR21-201ENST00000362134 72 ntBASIC2.3□□□□□ -2.04
VCX3BQ9H321 AL445529.1-201ENST00000398713 389 ntBASIC2.3□□□□□ -2.04
VCX3BQ9H321 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VCX3BQ9H321 RNU2-40P-201ENST00000410833 196 ntBASIC2.3□□□□□ -2.04
VCX3BQ9H321 AL158825.1-201ENST00000414735 521 ntBASIC2.3□□□□□ -2.04
VCX3BQ9H321 LINC01347-201ENST00000417964 355 ntBASIC2.3□□□□□ -2.04
VCX3BQ9H321 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.3□□□□□ -2.04
VCX3BQ9H321 COTL1P1-201ENST00000422309 375 ntBASIC2.3□□□□□ -2.04
VCX3BQ9H321 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.3□□□□□ -2.04
VCX3BQ9H321 MTCO1P57-201ENST00000432182 261 ntBASIC2.3□□□□□ -2.04
VCX3BQ9H321 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VCX3BQ9H321 ANKRD26P4-201ENST00000455755 950 ntBASIC2.3□□□□□ -2.04
VCX3BQ9H321 BTF3P5-201ENST00000457252 467 ntBASIC2.3□□□□□ -2.04
VCX3BQ9H321 AC128713.1-201ENST00000471495 306 ntBASIC2.3□□□□□ -2.04
VCX3BQ9H321 NDUFA5P9-201ENST00000472609 340 ntBASIC2.3□□□□□ -2.04
VCX3BQ9H321 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.3□□□□□ -2.04
VCX3BQ9H321 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.3□□□□□ -2.04
VCX3BQ9H321 SNORA70.16-201ENST00000516390 95 ntBASIC2.3□□□□□ -2.04
VCX3BQ9H321 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.3□□□□□ -2.04
VCX3BQ9H321 AC010306.1-201ENST00000523223 1117 ntBASIC2.3□□□□□ -2.04
VCX3BQ9H321 HAUS1P3-201ENST00000523909 662 ntBASIC2.3□□□□□ -2.04
VCX3BQ9H321 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.3□□□□□ -2.04
VCX3BQ9H321 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VCX3BQ9H321 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.3□□□□□ -2.04
VCX3BQ9H321 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC2.3□□□□□ -2.04
VCX3BQ9H321 AC011471.1-201ENST00000585766 187 ntBASIC2.3□□□□□ -2.04
VCX3BQ9H321 AC005498.1-201ENST00000592125 465 ntBASIC2.3□□□□□ -2.04
VCX3BQ9H321 AC002487.1-201ENST00000604565 994 ntBASIC2.3□□□□□ -2.04
VCX3BQ9H321 AC107214.2-201ENST00000608204 634 ntBASIC2.3□□□□□ -2.04
VCX3BQ9H321 VN1R74P-201ENST00000613259 503 ntBASIC2.3□□□□□ -2.04
VCX3BQ9H321 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.3□□□□□ -2.04
VCX3BQ9H321 AC098657.3-201ENST00000620434 263 ntBASIC2.3□□□□□ -2.04
VCX3BQ9H321 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
VCX3BQ9H321 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VCX3BQ9H321 AC097714.1-201ENST00000511272 1647 ntBASIC2.3□□□□□ -2.04
VCX3BQ9H321 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VCX3BQ9H321 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
VCX3BQ9H321 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VCX3BQ9H321 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.29□□□□□ -2.04
VCX3BQ9H321 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC2.29□□□□□ -2.04
VCX3BQ9H321 MIR17-201ENST00000385012 84 ntBASIC2.29□□□□□ -2.04
VCX3BQ9H321 SNORA46.1-201ENST00000391069 153 ntBASIC2.29□□□□□ -2.04
VCX3BQ9H321 ATP5F1P3-201ENST00000397213 657 ntBASIC2.29□□□□□ -2.04
VCX3BQ9H321 RN7SKP202-201ENST00000410439 330 ntBASIC2.29□□□□□ -2.04
VCX3BQ9H321 AC069157.1-201ENST00000421749 137 ntBASIC2.29□□□□□ -2.04
VCX3BQ9H321 AC098614.2-201ENST00000426040 255 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms