Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.98□□□□□ -1.77
CDT1Q9H211 AC004825.2-201ENST00000616634 455 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 AL356121.2-201ENST00000624715 780 ntBASIC3.98□□□□□ -1.77
CDT1Q9H211 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
CDT1Q9H211 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CDT1Q9H211 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDT1Q9H211 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CDT1Q9H211 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDT1Q9H211 XIAPP3-201ENST00000312918 795 ntBASIC3.97□□□□□ -1.77
CDT1Q9H211 AC007685.1-201ENST00000329806 452 ntBASIC3.97□□□□□ -1.77
CDT1Q9H211 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDT1Q9H211 MIR449B-201ENST00000384995 97 ntBASIC3.97□□□□□ -1.77
CDT1Q9H211 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.97□□□□□ -1.77
CDT1Q9H211 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.97□□□□□ -1.77
CDT1Q9H211 MIR320C1-201ENST00000408566 88 ntBASIC3.97□□□□□ -1.77
CDT1Q9H211 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.97□□□□□ -1.77
CDT1Q9H211 FNDC3CP-201ENST00000420795 1155 ntBASIC3.97□□□□□ -1.77
CDT1Q9H211 AC010975.2-201ENST00000427781 588 ntBASIC3.97□□□□□ -1.77
CDT1Q9H211 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.97□□□□□ -1.77
CDT1Q9H211 HSPD1P21-201ENST00000436541 245 ntBASIC3.97□□□□□ -1.77
CDT1Q9H211 AC092641.1-201ENST00000440229 772 ntBASIC3.97□□□□□ -1.77
CDT1Q9H211 MTND4P18-201ENST00000447010 465 ntBASIC3.97□□□□□ -1.77
CDT1Q9H211 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.97□□□□□ -1.77
CDT1Q9H211 SNRPGP5-201ENST00000456003 220 ntBASIC3.97□□□□□ -1.77
CDT1Q9H211 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.97□□□□□ -1.77
CDT1Q9H211 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.97□□□□□ -1.77
CDT1Q9H211 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.97□□□□□ -1.77
CDT1Q9H211 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDT1Q9H211 HIGD1AP3-201ENST00000515857 278 ntBASIC3.97□□□□□ -1.77
CDT1Q9H211 RN7SKP209-201ENST00000516888 304 ntBASIC3.97□□□□□ -1.77
CDT1Q9H211 IGKV2D-36-201ENST00000518643 226 ntBASIC3.97□□□□□ -1.77
CDT1Q9H211 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.97□□□□□ -1.77
CDT1Q9H211 IGKV2D-19-201ENST00000523346 262 ntBASIC3.97□□□□□ -1.77
CDT1Q9H211 AC013828.2-201ENST00000532487 235 ntBASIC3.97□□□□□ -1.77
CDT1Q9H211 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.97□□□□□ -1.77
CDT1Q9H211 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.97□□□□□ -1.77
CDT1Q9H211 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.97□□□□□ -1.77
CDT1Q9H211 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.97□□□□□ -1.77
CDT1Q9H211 AC053481.3-201ENST00000577881 843 ntBASIC3.97□□□□□ -1.77
CDT1Q9H211 MIR3922-201ENST00000585192 84 ntBASIC3.97□□□□□ -1.77
CDT1Q9H211 AC068276.1-201ENST00000605793 379 ntBASIC3.97□□□□□ -1.77
CDT1Q9H211 AC080013.4-201ENST00000607624 649 ntBASIC3.97□□□□□ -1.77
CDT1Q9H211 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDT1Q9H211 C2orf27A-204ENST00000623058 969 ntBASIC3.97□□□□□ -1.77
CDT1Q9H211 AC025048.6-202ENST00000627667 438 ntBASIC3.97□□□□□ -1.77
CDT1Q9H211 MIR4496-201ENST00000635896 61 ntBASIC3.97□□□□□ -1.77
CDT1Q9H211 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
CDT1Q9H211 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDT1Q9H211 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDT1Q9H211 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CDT1Q9H211 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CDT1Q9H211 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CDT1Q9H211 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CDT1Q9H211 DCAF13P1-201ENST00000495256 1330 ntBASIC3.96□□□□□ -1.77
CDT1Q9H211 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CDT1Q9H211 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.96□□□□□ -1.77
CDT1Q9H211 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.96□□□□□ -1.77
CDT1Q9H211 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDT1Q9H211 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDT1Q9H211 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDT1Q9H211 RNU5F-7P-201ENST00000363696 115 ntBASIC3.96□□□□□ -1.78
CDT1Q9H211 RNU6-343P-201ENST00000364709 104 ntBASIC3.96□□□□□ -1.78
CDT1Q9H211 RNU6-730P-201ENST00000383954 104 ntBASIC3.96□□□□□ -1.78
CDT1Q9H211 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.96□□□□□ -1.78
CDT1Q9H211 AC022028.1-201ENST00000412054 408 ntBASIC3.96□□□□□ -1.78
CDT1Q9H211 FCF1P9-201ENST00000412546 282 ntBASIC3.96□□□□□ -1.78
CDT1Q9H211 AC109780.2-201ENST00000413467 845 ntBASIC3.96□□□□□ -1.78
CDT1Q9H211 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.96□□□□□ -1.78
CDT1Q9H211 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.96□□□□□ -1.78
CDT1Q9H211 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.96□□□□□ -1.78
CDT1Q9H211 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.96□□□□□ -1.78
CDT1Q9H211 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.96□□□□□ -1.78
CDT1Q9H211 HSPE1P28-201ENST00000443139 211 ntBASIC3.96□□□□□ -1.78
CDT1Q9H211 AL451050.1-201ENST00000450126 415 ntBASIC3.96□□□□□ -1.78
CDT1Q9H211 PPIAP3-201ENST00000450588 505 ntBASIC3.96□□□□□ -1.78
CDT1Q9H211 AC099563.1-201ENST00000456086 418 ntBASIC3.96□□□□□ -1.78
CDT1Q9H211 snoU13.22-201ENST00000459428 104 ntBASIC3.96□□□□□ -1.78
CDT1Q9H211 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.96□□□□□ -1.78
CDT1Q9H211 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.96□□□□□ -1.78
CDT1Q9H211 BTF3L4P4-201ENST00000506381 449 ntBASIC3.96□□□□□ -1.78
CDT1Q9H211 ARL2BPP4-201ENST00000506854 471 ntBASIC3.96□□□□□ -1.78
CDT1Q9H211 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.96□□□□□ -1.78
CDT1Q9H211 MTCO3P44-201ENST00000510977 541 ntBASIC3.96□□□□□ -1.78
CDT1Q9H211 DUXAP2-201ENST00000519198 589 ntBASIC3.96□□□□□ -1.78
CDT1Q9H211 OR5G4P-201ENST00000525251 760 ntBASIC3.96□□□□□ -1.78
CDT1Q9H211 CCNG2P1-201ENST00000549521 1000 ntBASIC3.96□□□□□ -1.78
CDT1Q9H211 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.96□□□□□ -1.78
CDT1Q9H211 AL139286.1-201ENST00000604465 483 ntBASIC3.96□□□□□ -1.78
CDT1Q9H211 AP002360.4-201ENST00000606980 481 ntBASIC3.96□□□□□ -1.78
CDT1Q9H211 AC138749.5-201ENST00000611461 208 ntBASIC3.96□□□□□ -1.78
CDT1Q9H211 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.96□□□□□ -1.78
CDT1Q9H211 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.96□□□□□ -1.78
CDT1Q9H211 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDT1Q9H211 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDT1Q9H211 AL359893.1-201ENST00000447628 1580 ntBASIC3.96□□□□□ -1.78
CDT1Q9H211 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.96□□□□□ -1.78
CDT1Q9H211 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.96□□□□□ -1.78
CDT1Q9H211 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDT1Q9H211 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDT1Q9H211 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms