Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 MIR506-201ENST00000384998 124 ntBASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 SNORD65.1-201ENST00000390889 71 ntBASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 AL031121.1-201ENST00000406553 254 ntBASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 RPL5P18-201ENST00000406671 891 ntBASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 C1DP1-201ENST00000426049 402 ntBASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 AC009969.1-201ENST00000438726 172 ntBASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 SUMO2P2-201ENST00000456482 255 ntBASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 AL359385.1-201ENST00000456509 365 ntBASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 AC006445.1-201ENST00000491925 405 ntBASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 POU5F1P7-201ENST00000508759 541 ntBASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 AC112206.4-201ENST00000515142 405 ntBASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 OR5AK1P-201ENST00000524837 922 ntBASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 AP003102.1-201ENST00000525638 661 ntBASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 DNAJC8P1-201ENST00000554535 372 ntBASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 GTF2IP8-201ENST00000560687 584 ntBASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 TUG1_1.1-201ENST00000610654 145 ntBASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 MKKS-204ENST00000639674 192 ntBASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 MTND5P7-201ENST00000413558 1798 ntBASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 SNORD67-201ENST00000390833 111 ntBASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 AL079342.2-201ENST00000403367 482 ntBASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 RPS7P9-201ENST00000414704 586 ntBASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 BEND7P1-201ENST00000422058 457 ntBASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 AL512649.1-201ENST00000428997 581 ntBASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 AC092427.1-201ENST00000439177 601 ntBASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 MTCYBP11-201ENST00000447254 1109 ntBASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 AL592447.1-201ENST00000447592 540 ntBASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 RPL39P6-201ENST00000448289 150 ntBASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 PNPLA4P1-201ENST00000458328 305 ntBASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 AC104164.3-201ENST00000467363 1258 ntBASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 SUMO2P5-201ENST00000506790 245 ntBASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 RNA5SP385-201ENST00000515947 110 ntBASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 NDUFS5P6-201ENST00000529136 295 ntBASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 AC011260.1-201ENST00000578420 472 ntBASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 AC015688.2-201ENST00000584523 262 ntBASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 AC245036.5-201ENST00000596330 847 ntBASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 AC005332.6-201ENST00000613178 446 ntBASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 AL138880.2-201ENST00000616214 239 ntBASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 AL138955.1-201ENST00000622881 1040 ntBASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 AC106858.1-201ENST00000637497 429 ntBASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 AC073346.2-201ENST00000624724 2058 ntBASIC3.12□□□□□ -1.91
POLR1EQ9GZS1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 MIR208A-201ENST00000362287 71 ntBASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 U3.6-201ENST00000363622 211 ntBASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 RNU6-1257P-201ENST00000384625 110 ntBASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 RNA5SP252-201ENST00000391131 119 ntBASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 RNU2-43P-201ENST00000410306 190 ntBASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 LUZP4P1-201ENST00000415420 344 ntBASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 USP9YP21-201ENST00000420603 432 ntBASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 MTND2P5-201ENST00000432656 1006 ntBASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 AC011242.1-201ENST00000433596 1158 ntBASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 AC024082.2-201ENST00000434771 238 ntBASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 PTGES3P1-201ENST00000439531 483 ntBASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 MTCYBP42-201ENST00000444653 1130 ntBASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 MTCO3P11-201ENST00000455103 774 ntBASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 AC026410.2-201ENST00000460281 156 ntBASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 AC023424.2-201ENST00000493479 777 ntBASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 AC008427.1-201ENST00000503102 655 ntBASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 RN7SKP272-201ENST00000516988 232 ntBASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 AC125611.1-201ENST00000549563 229 ntBASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 MIR5195-201ENST00000583555 115 ntBASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 AC012493.2-201ENST00000595083 291 ntBASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 BNIP3P31-201ENST00000604515 566 ntBASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 AC004009.2-201ENST00000623016 728 ntBASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 MIR3651-201ENST00000630427 90 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms