Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 HMGN1P20-201ENST00000411849 300 ntBASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 SSXP4-201ENST00000451349 245 ntBASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 AC112187.1-201ENST00000455837 479 ntBASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 RN7SL188P-201ENST00000469842 285 ntBASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 RPS16P9-201ENST00000477220 427 ntBASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 AC006427.1-201ENST00000514359 712 ntBASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 Y_RNA.719-201ENST00000517156 106 ntBASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 AC025755.1-201ENST00000521306 278 ntBASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 MIR132-201ENST00000591554 101 ntBASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 AC009314.1-201ENST00000603871 304 ntBASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 BRDTP1-201ENST00000605735 677 ntBASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 SNORD113-5-201ENST00000607261 78 ntBASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 IGKV2OR2-10-201ENST00000613976 311 ntBASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 AC011476.5-201ENST00000615594 130 ntBASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 AP001541.1-201ENST00000623322 1904 ntBASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSBP4Q9BWG4 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 RNA5SP453-201ENST00000362503 119 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 Y_RNA.82-201ENST00000363000 102 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 Y_RNA.92-201ENST00000363043 102 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 SNORD1C-201ENST00000363315 78 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 Y_RNA.235-201ENST00000364412 102 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 Y_RNA.306-201ENST00000365015 102 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 Y_RNA.308-201ENST00000365043 101 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 Y_RNA.312-201ENST00000365089 102 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 Y_RNA.322-201ENST00000365151 102 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 Y_RNA.569-201ENST00000384749 103 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 MIR433-201ENST00000384837 93 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 AL590635.1-201ENST00000406314 586 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 Y_RNA.597-201ENST00000410463 100 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 RN7SKP137-201ENST00000411074 307 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 AL662791.3-201ENST00000413771 776 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 TMSB10P2-201ENST00000416049 131 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 MTCO1P39-201ENST00000426148 480 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 HMGB1P27-201ENST00000431429 603 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 Y_RNA.650-201ENST00000459002 102 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 AC091179.1-201ENST00000461606 579 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 AC007998.1-201ENST00000474156 672 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 RPL30P11-201ENST00000495304 339 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 RNU6-914P-201ENST00000516749 109 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 Y_RNA.777-201ENST00000516982 102 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 CARSP2-201ENST00000520688 277 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 AP004607.5-201ENST00000532034 217 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 AC091078.2-201ENST00000557145 559 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 AC091304.5-201ENST00000568969 158 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 RPL23AP87-202ENST00000573039 466 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 NF1P5-201ENST00000588287 448 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 Y_RNA.771-201ENST00000598668 102 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 AC123912.5-201ENST00000605470 343 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 Y_RNA.789-201ENST00000622480 102 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 AC012254.3-201ENST00000591183 2117 ntBASIC4.66□□□□□ -1.66
SSBP4Q9BWG4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms