Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AC091925.2-201ENST00000625059 256 ntBASIC4.37□□□□□ -1.71
NDC1Q9BTX1 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
NDC1Q9BTX1 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
NDC1Q9BTX1 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NDC1Q9BTX1 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NDC1Q9BTX1 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.37□□□□□ -1.71
NDC1Q9BTX1 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NDC1Q9BTX1 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NDC1Q9BTX1 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.36□□□□□ -1.71
NDC1Q9BTX1 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NDC1Q9BTX1 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NDC1Q9BTX1 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NDC1Q9BTX1 AL391684.1-202ENST00000641293 1636 ntBASIC4.36□□□□□ -1.71
NDC1Q9BTX1 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NDC1Q9BTX1 AC021146.4-201ENST00000309229 279 ntBASIC4.36□□□□□ -1.71
NDC1Q9BTX1 SNORA70.2-201ENST00000364506 135 ntBASIC4.36□□□□□ -1.71
NDC1Q9BTX1 SNORD51-201ENST00000384320 80 ntBASIC4.36□□□□□ -1.71
NDC1Q9BTX1 AL162578.1-201ENST00000406202 378 ntBASIC4.36□□□□□ -1.71
NDC1Q9BTX1 MIR1250-201ENST00000408098 113 ntBASIC4.36□□□□□ -1.71
NDC1Q9BTX1 RPS12P5-201ENST00000423449 371 ntBASIC4.36□□□□□ -1.71
NDC1Q9BTX1 AL138785.1-201ENST00000425821 331 ntBASIC4.36□□□□□ -1.71
NDC1Q9BTX1 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.36□□□□□ -1.71
NDC1Q9BTX1 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.36□□□□□ -1.71
NDC1Q9BTX1 ATP5JP1-201ENST00000431631 322 ntBASIC4.36□□□□□ -1.71
NDC1Q9BTX1 TIMM9P1-201ENST00000436122 256 ntBASIC4.36□□□□□ -1.71
NDC1Q9BTX1 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.36□□□□□ -1.71
NDC1Q9BTX1 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.36□□□□□ -1.71
NDC1Q9BTX1 RNU7-63P-201ENST00000459054 62 ntBASIC4.36□□□□□ -1.71
NDC1Q9BTX1 RPL37P6-202ENST00000464216 403 ntBASIC4.36□□□□□ -1.71
NDC1Q9BTX1 HMGN1P10-201ENST00000474557 553 ntBASIC4.36□□□□□ -1.71
NDC1Q9BTX1 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
NDC1Q9BTX1 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.36□□□□□ -1.71
NDC1Q9BTX1 AC022690.1-201ENST00000526681 550 ntBASIC4.36□□□□□ -1.71
NDC1Q9BTX1 AC023050.3-201ENST00000541142 333 ntBASIC4.36□□□□□ -1.71
NDC1Q9BTX1 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.36□□□□□ -1.71
NDC1Q9BTX1 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.36□□□□□ -1.71
NDC1Q9BTX1 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.36□□□□□ -1.71
NDC1Q9BTX1 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.36□□□□□ -1.71
NDC1Q9BTX1 AC067852.4-201ENST00000590314 478 ntBASIC4.36□□□□□ -1.71
NDC1Q9BTX1 AC010525.2-201ENST00000590920 195 ntBASIC4.36□□□□□ -1.71
NDC1Q9BTX1 uc_338.12-201ENST00000616344 181 ntBASIC4.36□□□□□ -1.71
NDC1Q9BTX1 AC125257.1-201ENST00000560400 2930 ntBASIC4.36□□□□□ -1.71
NDC1Q9BTX1 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.36□□□□□ -1.71
NDC1Q9BTX1 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
NDC1Q9BTX1 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.36□□□□□ -1.71
NDC1Q9BTX1 PABPC1P7-201ENST00000413177 1513 ntBASIC4.36□□□□□ -1.71
NDC1Q9BTX1 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 NACAP2-201ENST00000318548 624 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 Y_RNA.58-201ENST00000362807 102 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 Y_RNA.154-201ENST00000363624 102 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 RNA5SP447-201ENST00000363749 119 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 RNU5A-8P-201ENST00000364102 114 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 RNY3P1-201ENST00000365085 102 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 RNY3-201ENST00000365484 102 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 RNU6-74P-201ENST00000384235 107 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 Y_RNA.490-201ENST00000384413 102 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 RNU6-332P-201ENST00000391193 108 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 SNORA68.2-201ENST00000391263 128 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 RNU2-62P-201ENST00000410868 191 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 HMGN1P24-201ENST00000412282 298 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 AL353678.1-201ENST00000422735 741 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 RPEP3-201ENST00000425462 676 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 RAC1P7-201ENST00000445367 377 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 AC079781.2-201ENST00000446424 169 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 RPL7P12-201ENST00000446719 750 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 MTND1P9-201ENST00000453775 944 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 ISCUP1-201ENST00000454451 448 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 AC053481.1-201ENST00000467217 306 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 AC117522.3-201ENST00000507974 584 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 AC021146.1-201ENST00000511202 716 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 AC093840.1-201ENST00000511599 336 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 SNORD60.2-201ENST00000516883 86 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 RNU6-410P-201ENST00000517006 107 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 AC105029.1-201ENST00000520250 669 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 OR4P1P-201ENST00000530808 1136 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 TOMM20P2-201ENST00000540082 421 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 ATP5J2P6-201ENST00000565203 266 ntBASIC4.35□□□□□ -1.71
NDC1Q9BTX1 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.35□□□□□ -1.71
NDC1Q9BTX1 AC006329.2-201ENST00000611491 394 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms