Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 MTATP6P24-201ENST00000576835 677 ntBASIC3.16□□□□□ -1.9
SSX3Q99909 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.16□□□□□ -1.9
SSX3Q99909 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.16□□□□□ -1.9
SSX3Q99909 AC090186.1-201ENST00000605991 572 ntBASIC3.16□□□□□ -1.9
SSX3Q99909 AC092354.2-201ENST00000607786 514 ntBASIC3.16□□□□□ -1.9
SSX3Q99909 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.16□□□□□ -1.9
SSX3Q99909 AL607023.1-201ENST00000620045 248 ntBASIC3.16□□□□□ -1.9
SSX3Q99909 AC007490.1-201ENST00000624321 703 ntBASIC3.16□□□□□ -1.9
SSX3Q99909 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.16□□□□□ -1.9
SSX3Q99909 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SSX3Q99909 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SSX3Q99909 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
SSX3Q99909 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SSX3Q99909 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SSX3Q99909 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.16□□□□□ -1.9
SSX3Q99909 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.16□□□□□ -1.9
SSX3Q99909 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.16□□□□□ -1.9
SSX3Q99909 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SSX3Q99909 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
SSX3Q99909 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
SSX3Q99909 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.9
SSX3Q99909 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
SSX3Q99909 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.15□□□□□ -1.9
SSX3Q99909 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SSX3Q99909 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SSX3Q99909 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
SSX3Q99909 AC009812.4-201ENST00000569134 1805 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.15□□□□□ -1.91
SSX3Q99909 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
SSX3Q99909 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SSX3Q99909 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SSX3Q99909 RNU6-97P-201ENST00000363387 104 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.15□□□□□ -1.91
SSX3Q99909 DYNLT3P1-201ENST00000378574 347 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 SNORA1.3-201ENST00000384676 136 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 SNORA48.7-201ENST00000391302 135 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 MIR320C1-201ENST00000408566 88 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 SNORA57.3-201ENST00000411095 141 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.15□□□□□ -1.91
SSX3Q99909 AC010099.3-201ENST00000423896 409 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 AC002075.2-201ENST00000425207 252 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 RPL23AP69-201ENST00000431134 458 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.15□□□□□ -1.91
SSX3Q99909 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.15□□□□□ -1.91
SSX3Q99909 RANP8-201ENST00000444720 713 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.15□□□□□ -1.91
SSX3Q99909 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.15□□□□□ -1.91
SSX3Q99909 AC234775.1-201ENST00000454247 670 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 RPS27P29-201ENST00000463110 252 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 RN7SL542P-201ENST00000467147 294 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.15□□□□□ -1.91
SSX3Q99909 RPL7P5-201ENST00000471472 736 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 RPL31P60-201ENST00000478450 367 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.15□□□□□ -1.91
SSX3Q99909 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.15□□□□□ -1.91
SSX3Q99909 AC111000.2-201ENST00000507775 550 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.15□□□□□ -1.91
SSX3Q99909 NDUFA5P2-201ENST00000519723 344 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.15□□□□□ -1.91
SSX3Q99909 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.15□□□□□ -1.91
SSX3Q99909 AP003461.1-201ENST00000528866 78 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 YPEL5P3-201ENST00000547227 352 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.15□□□□□ -1.91
SSX3Q99909 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
SSX3Q99909 AL121576.1-201ENST00000556055 276 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.15□□□□□ -1.91
SSX3Q99909 AC020914.6-201ENST00000594327 272 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 AC011451.2-201ENST00000604303 598 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 AC063944.3-201ENST00000609969 533 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 AL355816.2-201ENST00000610049 647 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 FP236240.3-201ENST00000623061 327 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 AP000676.4-201ENST00000624659 623 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.15□□□□□ -1.91
SSX3Q99909 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.15□□□□□ -1.91
SSX3Q99909 AC110774.1-201ENST00000623567 2018 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 MAPK10-322ENST00000641485 4530 ntBASIC3.15□□□□□ -1.91
SSX3Q99909 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.15□□□□□ -1.91
SSX3Q99909 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SSX3Q99909 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
SSX3Q99909 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
SSX3Q99909 AC087359.1-201ENST00000508335 1740 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SSX3Q99909 RNU6-777P-201ENST00000364265 104 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 RNU6-744P-201ENST00000365557 107 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
SSX3Q99909 RNU6-1316P-201ENST00000384242 108 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 RNU6-1207P-201ENST00000384343 107 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SSX3Q99909 RSL24D1P4-201ENST00000400938 484 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 AL356421.1-201ENST00000403255 413 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.14□□□□□ -1.91
SSX3Q99909 RN7SKP156-201ENST00000410308 342 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 CCDC58P2-201ENST00000417131 366 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.14□□□□□ -1.91
SSX3Q99909 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.14□□□□□ -1.91
SSX3Q99909 AL022400.1-201ENST00000423946 935 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.14□□□□□ -1.91
SSX3Q99909 AL035407.1-201ENST00000429211 571 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 AL354941.1-201ENST00000438600 464 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 HMGB1P37-201ENST00000439613 609 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms