Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
IFT140Q96RY7 AC068790.3-201ENST00000602988 553 ntBASIC3.14□□□□□ -1.91
IFT140Q96RY7 AL139811.1-201ENST00000424779 2299 ntBASIC3.13□□□□□ -1.91
IFT140Q96RY7 RNU6-1320P-201ENST00000390838 107 ntBASIC3.13□□□□□ -1.91
IFT140Q96RY7 RNU6-1269P-201ENST00000391139 107 ntBASIC3.13□□□□□ -1.91
IFT140Q96RY7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
IFT140Q96RY7 RNU4-74P-201ENST00000411280 161 ntBASIC3.13□□□□□ -1.91
IFT140Q96RY7 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.13□□□□□ -1.91
IFT140Q96RY7 RNU6-599P-201ENST00000459383 107 ntBASIC3.13□□□□□ -1.91
IFT140Q96RY7 RNU6-1193P-201ENST00000459461 107 ntBASIC3.13□□□□□ -1.91
IFT140Q96RY7 TMEM248P1-201ENST00000510579 951 ntBASIC3.13□□□□□ -1.91
IFT140Q96RY7 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.13□□□□□ -1.91
IFT140Q96RY7 SNORA31.26-201ENST00000517250 137 ntBASIC3.13□□□□□ -1.91
IFT140Q96RY7 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.13□□□□□ -1.91
IFT140Q96RY7 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.13□□□□□ -1.91
IFT140Q96RY7 TPMTP1-201ENST00000592307 737 ntBASIC3.13□□□□□ -1.91
IFT140Q96RY7 MIR6504-201ENST00000613520 61 ntBASIC3.13□□□□□ -1.91
IFT140Q96RY7 RNU6-368P-201ENST00000620928 107 ntBASIC3.13□□□□□ -1.91
IFT140Q96RY7 RNU6-538P-201ENST00000622329 107 ntBASIC3.13□□□□□ -1.91
IFT140Q96RY7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
IFT140Q96RY7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
IFT140Q96RY7 AC027124.2-201ENST00000428249 105 ntBASIC3.12□□□□□ -1.91
IFT140Q96RY7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.12□□□□□ -1.91
IFT140Q96RY7 AP000705.1-201ENST00000454567 350 ntBASIC3.12□□□□□ -1.91
IFT140Q96RY7 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.12□□□□□ -1.91
IFT140Q96RY7 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.12□□□□□ -1.91
IFT140Q96RY7 AC131902.3-201ENST00000611767 581 ntBASIC3.12□□□□□ -1.91
IFT140Q96RY7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.12□□□□□ -1.91
IFT140Q96RY7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
IFT140Q96RY7 RNU2-17P-201ENST00000410290 190 ntBASIC3.11□□□□□ -1.91
IFT140Q96RY7 AC092832.1-201ENST00000422934 400 ntBASIC3.11□□□□□ -1.91
IFT140Q96RY7 RPL23AP16-201ENST00000441715 421 ntBASIC3.11□□□□□ -1.91
IFT140Q96RY7 RNU7-157P-201ENST00000459600 66 ntBASIC3.11□□□□□ -1.91
IFT140Q96RY7 OR4P1P-201ENST00000530808 1136 ntBASIC3.11□□□□□ -1.91
IFT140Q96RY7 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
IFT140Q96RY7 MIR3670-2-201ENST00000582974 65 ntBASIC3.11□□□□□ -1.91
IFT140Q96RY7 MIR3670-1-201ENST00000584160 65 ntBASIC3.11□□□□□ -1.91
IFT140Q96RY7 MIR3670-3-201ENST00000584855 65 ntBASIC3.11□□□□□ -1.91
IFT140Q96RY7 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.11□□□□□ -1.91
IFT140Q96RY7 MIR3670-4-201ENST00000612260 65 ntBASIC3.11□□□□□ -1.91
IFT140Q96RY7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC3.11□□□□□ -1.91
IFT140Q96RY7 AC007256.1-201ENST00000392253 2765 ntBASIC3.11□□□□□ -1.91
IFT140Q96RY7 AC106901.1-201ENST00000425086 698 ntBASIC3.1□□□□□ -1.91
IFT140Q96RY7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.1□□□□□ -1.91
IFT140Q96RY7 RPL39P40-201ENST00000445481 146 ntBASIC3.1□□□□□ -1.91
IFT140Q96RY7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.1□□□□□ -1.91
IFT140Q96RY7 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.1□□□□□ -1.91
IFT140Q96RY7 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC3.1□□□□□ -1.91
IFT140Q96RY7 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.1□□□□□ -1.91
IFT140Q96RY7 AC007687.1-201ENST00000602704 304 ntBASIC3.1□□□□□ -1.91
IFT140Q96RY7 AC106730.3-201ENST00000624568 641 ntBASIC3.1□□□□□ -1.91
IFT140Q96RY7 XKRY2-202ENST00000623874 1581 ntBASIC3.1□□□□□ -1.91
IFT140Q96RY7 XKRY-202ENST00000624960 1581 ntBASIC3.1□□□□□ -1.91
IFT140Q96RY7 AC114546.3-201ENST00000623582 1734 ntBASIC3.1□□□□□ -1.91
IFT140Q96RY7 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
IFT140Q96RY7 AC004965.1-201ENST00000413033 213 ntBASIC3.09□□□□□ -1.91
IFT140Q96RY7 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.09□□□□□ -1.91
IFT140Q96RY7 AC092451.1-201ENST00000480211 153 ntBASIC3.09□□□□□ -1.91
IFT140Q96RY7 AC107393.1-201ENST00000512403 346 ntBASIC3.09□□□□□ -1.91
IFT140Q96RY7 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.09□□□□□ -1.91
IFT140Q96RY7 uc_338.5-201ENST00000611839 155 ntBASIC3.09□□□□□ -1.91
IFT140Q96RY7 VN1R74P-201ENST00000613259 503 ntBASIC3.09□□□□□ -1.91
IFT140Q96RY7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
IFT140Q96RY7 Z82209.1-201ENST00000422141 2135 ntBASIC3.09□□□□□ -1.91
IFT140Q96RY7 API5P2-201ENST00000397055 1498 ntBASIC3.09□□□□□ -1.92
IFT140Q96RY7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.09□□□□□ -1.92
IFT140Q96RY7 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.09□□□□□ -1.92
IFT140Q96RY7 RPS26P21-201ENST00000475397 348 ntBASIC3.09□□□□□ -1.92
IFT140Q96RY7 TBCAP3-201ENST00000512475 312 ntBASIC3.09□□□□□ -1.92
IFT140Q96RY7 RNA5SP480-201ENST00000516840 109 ntBASIC3.09□□□□□ -1.92
IFT140Q96RY7 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.09□□□□□ -1.92
IFT140Q96RY7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.09□□□□□ -1.92
IFT140Q96RY7 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.09□□□□□ -1.92
IFT140Q96RY7 ARL2BPP2-201ENST00000550907 489 ntBASIC3.09□□□□□ -1.92
IFT140Q96RY7 AL035411.2-201ENST00000604022 421 ntBASIC3.09□□□□□ -1.92
IFT140Q96RY7 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.09□□□□□ -1.92
IFT140Q96RY7 RNU6-707P-201ENST00000364647 95 ntBASIC3.08□□□□□ -1.92
IFT140Q96RY7 MTND4LP12-201ENST00000448237 295 ntBASIC3.08□□□□□ -1.92
IFT140Q96RY7 RPL5P13-201ENST00000462840 709 ntBASIC3.08□□□□□ -1.92
IFT140Q96RY7 MTND4LP22-201ENST00000508209 276 ntBASIC3.08□□□□□ -1.92
IFT140Q96RY7 RN7SKP40-201ENST00000517211 242 ntBASIC3.08□□□□□ -1.92
IFT140Q96RY7 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.08□□□□□ -1.92
IFT140Q96RY7 WISP1-OT1-201ENST00000602893 642 ntBASIC3.08□□□□□ -1.92
IFT140Q96RY7 AP000787.2-201ENST00000604432 568 ntBASIC3.08□□□□□ -1.92
IFT140Q96RY7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.08□□□□□ -1.92
IFT140Q96RY7 MIR8081-201ENST00000611533 95 ntBASIC3.08□□□□□ -1.92
IFT140Q96RY7 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.08□□□□□ -1.92
IFT140Q96RY7 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
IFT140Q96RY7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
IFT140Q96RY7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
IFT140Q96RY7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.07□□□□□ -1.92
IFT140Q96RY7 AL138799.3-201ENST00000438968 350 ntBASIC3.07□□□□□ -1.92
IFT140Q96RY7 RPL7P31-201ENST00000450192 724 ntBASIC3.07□□□□□ -1.92
IFT140Q96RY7 BX322784.1-201ENST00000455793 1077 ntBASIC3.07□□□□□ -1.92
IFT140Q96RY7 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.07□□□□□ -1.92
IFT140Q96RY7 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.07□□□□□ -1.92
IFT140Q96RY7 RNU6-826P-201ENST00000516827 104 ntBASIC3.07□□□□□ -1.92
IFT140Q96RY7 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.07□□□□□ -1.92
IFT140Q96RY7 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.07□□□□□ -1.92
IFT140Q96RY7 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms