Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 LSM3P2-201ENST00000551246 273 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 SETP2-201ENST00000553886 926 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 AL163153.1-201ENST00000554223 283 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 MIR4503-201ENST00000582187 83 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 MIR3942-201ENST00000585264 109 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 uc_338.12-201ENST00000616344 181 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 BX005214.3-202ENST00000619809 325 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 XPOTP1-201ENST00000443317 2398 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 AC008758.3-201ENST00000507003 1829 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 Y_RNA.187-201ENST00000363918 113 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 Y_RNA.530-201ENST00000384587 101 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 RNU6-331P-201ENST00000384724 107 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 RNU6-903P-201ENST00000391270 109 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 ELOCP19-201ENST00000411919 318 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 PMCHL1-202ENST00000423102 261 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 MTCYBP10-201ENST00000424905 650 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 MTATP6P16-201ENST00000434543 526 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AC005726.1-201ENST00000494679 427 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 PTP4A1P4-201ENST00000512479 322 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 RN7SKP24-201ENST00000515888 284 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 SNORD27.1-201ENST00000516319 72 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 OR4P1P-201ENST00000530808 1136 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 RN7SL802P-201ENST00000577858 299 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 MIR3149-201ENST00000584629 83 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AC024220.1-201ENST00000603675 484 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 CYP2C61P-201ENST00000604072 290 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AL022099.1-201ENST00000604551 712 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AC010680.4-201ENST00000605334 543 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AC006133.1-201ENST00000617106 264 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AL022401.1-201ENST00000619498 108 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AC244100.1-202ENST00000621554 382 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 U6.114-201ENST00000636407 96 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AP000756.2-201ENST00000624168 2567 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 SMG1P6-201ENST00000532337 2930 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 MIR92A2-201ENST00000385299 75 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 RNU6-278P-201ENST00000390945 109 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 RNA5SP397-201ENST00000391323 118 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 GSTM3P2-201ENST00000412746 530 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 COX6CP15-201ENST00000426313 211 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 PSMA6P3-201ENST00000428242 164 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AC108734.1-201ENST00000439549 399 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 SNORA59A-201ENST00000459326 152 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AC087879.1-201ENST00000474343 374 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AC091885.1-201ENST00000506658 268 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 RNU6-864P-201ENST00000516256 108 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 RNA5SP143-201ENST00000516936 115 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 RNA5SP503-201ENST00000517047 117 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 MYL12AP1-201ENST00000518490 515 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 RANP9-201ENST00000519957 271 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 HMGB1P41-201ENST00000520234 440 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AC063950.1-201ENST00000552036 308 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 MIR4790-201ENST00000577799 79 ntBASIC5.48□□□□□ -1.53
SYNGAP1Q96PV0 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms