Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC009318.2-201ENST00000610917 651 ntBASIC1.57□□□□□ -2.16
GAFA1Q96PS6 MIR6895-201ENST00000613497 78 ntBASIC1.57□□□□□ -2.16
GAFA1Q96PS6 AC243756.2-201ENST00000618406 463 ntBASIC1.57□□□□□ -2.16
GAFA1Q96PS6 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
GAFA1Q96PS6 DUXAP9-208ENST00000622815 614 ntBASIC1.57□□□□□ -2.16
GAFA1Q96PS6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.57□□□□□ -2.16
GAFA1Q96PS6 AC010680.1-201ENST00000590024 3590 ntBASIC1.57□□□□□ -2.16
GAFA1Q96PS6 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC1.57□□□□□ -2.16
GAFA1Q96PS6 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.57□□□□□ -2.16
GAFA1Q96PS6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
GAFA1Q96PS6 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.56□□□□□ -2.16
GAFA1Q96PS6 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
GAFA1Q96PS6 ZNF33CP-201ENST00000432492 2030 ntBASIC1.56□□□□□ -2.16
GAFA1Q96PS6 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.56□□□□□ -2.16
GAFA1Q96PS6 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.56□□□□□ -2.16
GAFA1Q96PS6 AC138915.1-201ENST00000565427 1685 ntBASIC1.56□□□□□ -2.16
GAFA1Q96PS6 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
GAFA1Q96PS6 OR56A5-201ENST00000340110 738 ntBASIC1.56□□□□□ -2.16
GAFA1Q96PS6 RNU6-356P-201ENST00000384140 107 ntBASIC1.56□□□□□ -2.16
GAFA1Q96PS6 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
GAFA1Q96PS6 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC1.56□□□□□ -2.16
GAFA1Q96PS6 AC114973.1-201ENST00000429057 632 ntBASIC1.56□□□□□ -2.16
GAFA1Q96PS6 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.56□□□□□ -2.16
GAFA1Q96PS6 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.56□□□□□ -2.16
GAFA1Q96PS6 HMGB3P12-201ENST00000438745 556 ntBASIC1.56□□□□□ -2.16
GAFA1Q96PS6 AC003989.2-201ENST00000440224 169 ntBASIC1.56□□□□□ -2.16
GAFA1Q96PS6 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.56□□□□□ -2.16
GAFA1Q96PS6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC1.56□□□□□ -2.16
GAFA1Q96PS6 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC1.56□□□□□ -2.16
GAFA1Q96PS6 AC072039.1-201ENST00000477611 581 ntBASIC1.56□□□□□ -2.16
GAFA1Q96PS6 AC017007.3-201ENST00000479865 435 ntBASIC1.56□□□□□ -2.16
GAFA1Q96PS6 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.56□□□□□ -2.16
GAFA1Q96PS6 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.56□□□□□ -2.16
GAFA1Q96PS6 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.56□□□□□ -2.16
GAFA1Q96PS6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.56□□□□□ -2.16
GAFA1Q96PS6 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.56□□□□□ -2.16
GAFA1Q96PS6 NBEAP1-201ENST00000554452 979 ntBASIC1.56□□□□□ -2.16
GAFA1Q96PS6 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.56□□□□□ -2.16
GAFA1Q96PS6 AC110588.1-201ENST00000559699 137 ntBASIC1.56□□□□□ -2.16
GAFA1Q96PS6 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC1.56□□□□□ -2.16
GAFA1Q96PS6 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.56□□□□□ -2.16
GAFA1Q96PS6 AC068790.3-201ENST00000602988 553 ntBASIC1.56□□□□□ -2.16
GAFA1Q96PS6 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC1.56□□□□□ -2.16
GAFA1Q96PS6 AC068831.7-201ENST00000616954 363 ntBASIC1.56□□□□□ -2.16
GAFA1Q96PS6 AC022079.2-201ENST00000619739 566 ntBASIC1.56□□□□□ -2.16
GAFA1Q96PS6 AC024023.1-201ENST00000624530 922 ntBASIC1.56□□□□□ -2.16
GAFA1Q96PS6 PABPC1P9-201ENST00000426076 1612 ntBASIC1.55□□□□□ -2.16
GAFA1Q96PS6 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
GAFA1Q96PS6 SNORA51.11-201ENST00000384442 131 ntBASIC1.55□□□□□ -2.16
GAFA1Q96PS6 SNORA11.2-201ENST00000408318 127 ntBASIC1.55□□□□□ -2.16
GAFA1Q96PS6 RNU2-71P-201ENST00000411395 189 ntBASIC1.55□□□□□ -2.16
GAFA1Q96PS6 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.55□□□□□ -2.16
GAFA1Q96PS6 AC008173.1-201ENST00000418901 264 ntBASIC1.55□□□□□ -2.16
GAFA1Q96PS6 HMGN2P30-201ENST00000423237 256 ntBASIC1.55□□□□□ -2.16
GAFA1Q96PS6 AC233728.2-201ENST00000425348 757 ntBASIC1.55□□□□□ -2.16
GAFA1Q96PS6 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.55□□□□□ -2.16
GAFA1Q96PS6 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.55□□□□□ -2.16
GAFA1Q96PS6 AC146507.1-201ENST00000468335 354 ntBASIC1.55□□□□□ -2.16
GAFA1Q96PS6 TRBV1-201ENST00000476502 284 ntBASIC1.55□□□□□ -2.16
GAFA1Q96PS6 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
GAFA1Q96PS6 AC009901.1-201ENST00000506703 541 ntBASIC1.55□□□□□ -2.16
GAFA1Q96PS6 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.55□□□□□ -2.16
GAFA1Q96PS6 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.55□□□□□ -2.16
GAFA1Q96PS6 RNA5SP82-201ENST00000516707 92 ntBASIC1.55□□□□□ -2.16
GAFA1Q96PS6 AP000916.1-201ENST00000533869 835 ntBASIC1.55□□□□□ -2.16
GAFA1Q96PS6 NOP56P3-201ENST00000549457 385 ntBASIC1.55□□□□□ -2.16
GAFA1Q96PS6 OR4U1P-201ENST00000554958 912 ntBASIC1.55□□□□□ -2.16
GAFA1Q96PS6 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.55□□□□□ -2.16
GAFA1Q96PS6 VN1R74P-201ENST00000613259 503 ntBASIC1.55□□□□□ -2.16
GAFA1Q96PS6 AC140725.3-201ENST00000616193 880 ntBASIC1.55□□□□□ -2.16
GAFA1Q96PS6 AC002064.3-201ENST00000623448 346 ntBASIC1.55□□□□□ -2.16
GAFA1Q96PS6 AC004944.1-201ENST00000517807 3059 ntBASIC1.55□□□□□ -2.16
GAFA1Q96PS6 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
GAFA1Q96PS6 HSPE1P11-201ENST00000339579 310 ntBASIC1.54□□□□□ -2.16
GAFA1Q96PS6 MIR583-201ENST00000384846 75 ntBASIC1.54□□□□□ -2.16
GAFA1Q96PS6 MIR1261-201ENST00000408659 82 ntBASIC1.54□□□□□ -2.16
GAFA1Q96PS6 AL513331.1-201ENST00000411908 397 ntBASIC1.54□□□□□ -2.16
GAFA1Q96PS6 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.54□□□□□ -2.16
GAFA1Q96PS6 MORF4L1P6-201ENST00000418771 268 ntBASIC1.54□□□□□ -2.16
GAFA1Q96PS6 BX276092.3-201ENST00000424182 230 ntBASIC1.54□□□□□ -2.16
GAFA1Q96PS6 SUMO1P4-201ENST00000429430 302 ntBASIC1.54□□□□□ -2.16
GAFA1Q96PS6 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.54□□□□□ -2.16
GAFA1Q96PS6 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.54□□□□□ -2.16
GAFA1Q96PS6 MTND4P2-201ENST00000507767 1203 ntBASIC1.54□□□□□ -2.16
GAFA1Q96PS6 HMGB3P3-201ENST00000510526 400 ntBASIC1.54□□□□□ -2.16
GAFA1Q96PS6 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.54□□□□□ -2.16
GAFA1Q96PS6 RPPH1-2P-201ENST00000516688 293 ntBASIC1.54□□□□□ -2.16
GAFA1Q96PS6 RNU1-104P-201ENST00000517280 175 ntBASIC1.54□□□□□ -2.16
GAFA1Q96PS6 AC087373.1-201ENST00000524920 491 ntBASIC1.54□□□□□ -2.16
GAFA1Q96PS6 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.54□□□□□ -2.16
GAFA1Q96PS6 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.54□□□□□ -2.16
GAFA1Q96PS6 MIR3935-201ENST00000583472 104 ntBASIC1.54□□□□□ -2.16
GAFA1Q96PS6 NTAN1P1-201ENST00000603150 646 ntBASIC1.54□□□□□ -2.16
GAFA1Q96PS6 RPP40P2-201ENST00000603596 712 ntBASIC1.54□□□□□ -2.16
GAFA1Q96PS6 AL133507.1-201ENST00000605269 557 ntBASIC1.54□□□□□ -2.16
GAFA1Q96PS6 AL161734.1-201ENST00000609720 557 ntBASIC1.54□□□□□ -2.16
GAFA1Q96PS6 AL590099.1-201ENST00000615276 138 ntBASIC1.54□□□□□ -2.16
GAFA1Q96PS6 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.54□□□□□ -2.16
GAFA1Q96PS6 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.54□□□□□ -2.16
GAFA1Q96PS6 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms