Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AC114322.1-201ENST00000506771 926 ntBASIC3.4□□□□□ -1.87
ZNF560Q96MR9 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF560Q96MR9 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.4□□□□□ -1.87
ZNF560Q96MR9 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.4□□□□□ -1.87
ZNF560Q96MR9 AL391156.1-201ENST00000554965 554 ntBASIC3.4□□□□□ -1.87
ZNF560Q96MR9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.4□□□□□ -1.87
ZNF560Q96MR9 AP002907.1-201ENST00000606361 1430 ntBASIC3.4□□□□□ -1.87
ZNF560Q96MR9 AL121652.1-201ENST00000608851 448 ntBASIC3.4□□□□□ -1.87
ZNF560Q96MR9 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF560Q96MR9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF560Q96MR9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF560Q96MR9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF560Q96MR9 AL079305.1-201ENST00000623159 3008 ntBASIC3.4□□□□□ -1.87
ZNF560Q96MR9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF560Q96MR9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF560Q96MR9 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.39□□□□□ -1.87
ZNF560Q96MR9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF560Q96MR9 OR4G11P-202ENST00000642116 1414 ntBASIC3.39□□□□□ -1.87
ZNF560Q96MR9 RNU6-560P-201ENST00000364007 108 ntBASIC3.39□□□□□ -1.87
ZNF560Q96MR9 Y_RNA.408-201ENST00000383987 102 ntBASIC3.39□□□□□ -1.87
ZNF560Q96MR9 RNU6-1122P-201ENST00000384449 107 ntBASIC3.39□□□□□ -1.87
ZNF560Q96MR9 AL136372.1-201ENST00000403060 228 ntBASIC3.39□□□□□ -1.87
ZNF560Q96MR9 AL136310.1-201ENST00000404926 654 ntBASIC3.39□□□□□ -1.87
ZNF560Q96MR9 AC007899.1-201ENST00000412776 775 ntBASIC3.39□□□□□ -1.87
ZNF560Q96MR9 MTATP6P20-201ENST00000414147 562 ntBASIC3.39□□□□□ -1.87
ZNF560Q96MR9 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF560Q96MR9 AL137014.1-201ENST00000420490 1226 ntBASIC3.39□□□□□ -1.87
ZNF560Q96MR9 AC007742.1-201ENST00000425789 329 ntBASIC3.39□□□□□ -1.87
ZNF560Q96MR9 NANOGP2-201ENST00000435391 727 ntBASIC3.39□□□□□ -1.87
ZNF560Q96MR9 ELOCP26-201ENST00000436067 329 ntBASIC3.39□□□□□ -1.87
ZNF560Q96MR9 MTND4P6-201ENST00000438297 472 ntBASIC3.39□□□□□ -1.87
ZNF560Q96MR9 MTCYBP34-201ENST00000439552 670 ntBASIC3.39□□□□□ -1.87
ZNF560Q96MR9 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.39□□□□□ -1.87
ZNF560Q96MR9 AC005297.2-201ENST00000450430 606 ntBASIC3.39□□□□□ -1.87
ZNF560Q96MR9 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF560Q96MR9 ARPC3P2-201ENST00000457786 533 ntBASIC3.39□□□□□ -1.87
ZNF560Q96MR9 AC093278.1-201ENST00000494700 600 ntBASIC3.39□□□□□ -1.87
ZNF560Q96MR9 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF560Q96MR9 TMEM251P1-201ENST00000503717 318 ntBASIC3.39□□□□□ -1.87
ZNF560Q96MR9 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF560Q96MR9 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.39□□□□□ -1.87
ZNF560Q96MR9 RNU6-583P-201ENST00000516012 92 ntBASIC3.39□□□□□ -1.87
ZNF560Q96MR9 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF560Q96MR9 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF560Q96MR9 OR4H12P-201ENST00000556269 907 ntBASIC3.39□□□□□ -1.87
ZNF560Q96MR9 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF560Q96MR9 MAGOH2P-202ENST00000584384 429 ntBASIC3.39□□□□□ -1.87
ZNF560Q96MR9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF560Q96MR9 AL391834.2-201ENST00000609982 546 ntBASIC3.39□□□□□ -1.87
ZNF560Q96MR9 AC099506.2-201ENST00000623074 221 ntBASIC3.39□□□□□ -1.87
ZNF560Q96MR9 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF560Q96MR9 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF560Q96MR9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF560Q96MR9 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.38□□□□□ -1.87
ZNF560Q96MR9 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF560Q96MR9 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
ZNF560Q96MR9 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.38□□□□□ -1.87
ZNF560Q96MR9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF560Q96MR9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
ZNF560Q96MR9 RNU6-413P-201ENST00000384115 107 ntBASIC3.38□□□□□ -1.87
ZNF560Q96MR9 RPS15AP38-201ENST00000413110 372 ntBASIC3.38□□□□□ -1.87
ZNF560Q96MR9 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.38□□□□□ -1.87
ZNF560Q96MR9 MTATP6P27-201ENST00000416987 621 ntBASIC3.38□□□□□ -1.87
ZNF560Q96MR9 HSFY7P-201ENST00000432672 318 ntBASIC3.38□□□□□ -1.87
ZNF560Q96MR9 HSFY8P-201ENST00000437934 318 ntBASIC3.38□□□□□ -1.87
ZNF560Q96MR9 HSPE1P28-201ENST00000443139 211 ntBASIC3.38□□□□□ -1.87
ZNF560Q96MR9 AC007327.1-201ENST00000447461 264 ntBASIC3.38□□□□□ -1.87
ZNF560Q96MR9 AL589880.1-201ENST00000448271 287 ntBASIC3.38□□□□□ -1.87
ZNF560Q96MR9 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.38□□□□□ -1.87
ZNF560Q96MR9 HSFY5P-201ENST00000453726 309 ntBASIC3.38□□□□□ -1.87
ZNF560Q96MR9 MTCO3P11-201ENST00000455103 774 ntBASIC3.38□□□□□ -1.87
ZNF560Q96MR9 RPL18AP17-201ENST00000455326 198 ntBASIC3.38□□□□□ -1.87
ZNF560Q96MR9 RPS27P29-201ENST00000463110 252 ntBASIC3.38□□□□□ -1.87
ZNF560Q96MR9 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.38□□□□□ -1.87
ZNF560Q96MR9 AC092185.1-201ENST00000491371 97 ntBASIC3.38□□□□□ -1.87
ZNF560Q96MR9 TXNP6-201ENST00000510190 310 ntBASIC3.38□□□□□ -1.87
ZNF560Q96MR9 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.38□□□□□ -1.87
ZNF560Q96MR9 AC008837.2-201ENST00000513076 418 ntBASIC3.38□□□□□ -1.87
ZNF560Q96MR9 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.38□□□□□ -1.87
ZNF560Q96MR9 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.38□□□□□ -1.87
ZNF560Q96MR9 OR5AK1P-201ENST00000524837 922 ntBASIC3.38□□□□□ -1.87
ZNF560Q96MR9 AC024224.1-201ENST00000538284 609 ntBASIC3.38□□□□□ -1.87
ZNF560Q96MR9 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.38□□□□□ -1.87
ZNF560Q96MR9 CR383656.7-201ENST00000548164 174 ntBASIC3.38□□□□□ -1.87
ZNF560Q96MR9 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF560Q96MR9 MIR4474-201ENST00000579189 78 ntBASIC3.38□□□□□ -1.87
ZNF560Q96MR9 MIR4325-201ENST00000583049 90 ntBASIC3.38□□□□□ -1.87
ZNF560Q96MR9 AC015688.2-201ENST00000584523 262 ntBASIC3.38□□□□□ -1.87
ZNF560Q96MR9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF560Q96MR9 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.38□□□□□ -1.87
ZNF560Q96MR9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
ZNF560Q96MR9 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.38□□□□□ -1.87
ZNF560Q96MR9 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ZNF560Q96MR9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ZNF560Q96MR9 RNU6-173P-201ENST00000364215 104 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 SKINT1L-201ENST00000401057 817 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 AL356131.1-201ENST00000405826 414 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 RNA5SP80-201ENST00000410475 111 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 RNU2-47P-201ENST00000410649 186 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 AL592310.1-201ENST00000414330 671 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms