Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AL445183.3-201ENST00000414168 502 ntBASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 PAICSP7-201ENST00000419829 962 ntBASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 AC090774.1-201ENST00000435925 246 ntBASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 AC122718.1-201ENST00000439448 744 ntBASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 ST13P20-201ENST00000447996 1065 ntBASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 TRGVB-201ENST00000453257 471 ntBASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 snoU13.28-201ENST00000459235 104 ntBASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 AC097493.1-201ENST00000463958 372 ntBASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 VPS26AP1-201ENST00000483197 979 ntBASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 RPS27P21-201ENST00000486977 252 ntBASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 MIR514B-201ENST00000516774 80 ntBASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 RN7SKP272-201ENST00000516988 232 ntBASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 AC007224.1-201ENST00000564410 144 ntBASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 AC022916.3-201ENST00000592961 742 ntBASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 VN1R9P-201ENST00000614184 867 ntBASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 AC009090.3-201ENST00000616553 565 ntBASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 AC025263.3-201ENST00000622965 1396 ntBASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 AL109809.4-201ENST00000603520 2185 ntBASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 OR1S2-201ENST00000302592 978 ntBASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 RN7SKP226-201ENST00000364912 300 ntBASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 RPL7P25-201ENST00000404151 721 ntBASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 RNU6-77P-201ENST00000410554 91 ntBASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 Y_RNA.625-201ENST00000411256 107 ntBASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 HMGN2P38-201ENST00000423806 265 ntBASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 AC073063.1-201ENST00000434352 607 ntBASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 RPL7P55-201ENST00000450522 746 ntBASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 RPL21P13-201ENST00000488305 481 ntBASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 HIGD1AP6-201ENST00000521833 279 ntBASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 AC004217.3-201ENST00000551552 878 ntBASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 GTF2IP8-201ENST00000560687 584 ntBASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 AC079148.1-201ENST00000565944 819 ntBASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 MIR3921-201ENST00000577308 85 ntBASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 AC067959.1-201ENST00000604334 379 ntBASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 AC107214.2-201ENST00000608204 634 ntBASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 AC090115.4-201ENST00000609970 188 ntBASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 MIR622-201ENST00000638396 96 ntBASIC3.18□□□□□ -1.9
PKNOX2Q96KN3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 RPL9P7-201ENST00000330965 580 ntBASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 MIR16-2-201ENST00000362117 81 ntBASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 RN7SKP227-201ENST00000364445 330 ntBASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 AL359837.1-201ENST00000381357 287 ntBASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 AC010881.1-201ENST00000433830 235 ntBASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 AL714022.1-201ENST00000439897 151 ntBASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 AL929288.2-201ENST00000446368 407 ntBASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 AL031659.1-201ENST00000447075 539 ntBASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 RPL26P28-201ENST00000451325 435 ntBASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 AC116337.2-201ENST00000477662 156 ntBASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 AC136624.4-201ENST00000573044 370 ntBASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 AC010738.1-201ENST00000604970 987 ntBASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 AL020991.1-201ENST00000612314 373 ntBASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.17□□□□□ -1.9
PKNOX2Q96KN3 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 ZNF285B-201ENST00000561698 1767 ntBASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 RNU6-481P-201ENST00000384194 107 ntBASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 U3.20-201ENST00000390909 217 ntBASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 BX323014.1-201ENST00000412876 237 ntBASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 WARS2P1-201ENST00000429678 537 ntBASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 AL445584.1-201ENST00000431451 330 ntBASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 FGF7P5-201ENST00000441829 291 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms