Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RPL35AP15-201ENST00000468042 339 ntBASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 RPL23AP65-201ENST00000475608 468 ntBASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 FGF7P4-201ENST00000509595 295 ntBASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 AC016065.2-201ENST00000514530 444 ntBASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 AP003497.1-201ENST00000528472 562 ntBASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 CYP4A43P-201ENST00000568156 121 ntBASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 MIR3146-201ENST00000580367 79 ntBASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 AC008638.3-201ENST00000603341 463 ntBASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 AC007038.2-201ENST00000608095 740 ntBASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 AC064801.1-201ENST00000612025 407 ntBASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 CR381572.1-201ENST00000625098 102 ntBASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 MTND1P37-201ENST00000636562 264 ntBASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 ZNF680P1-201ENST00000436625 1469 ntBASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.06□□□□□ -1.6
CHAMP1Q96JM3 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 AC139713.2-214ENST00000642059 1811 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 RNA5SP258-201ENST00000362750 119 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 RNU6-249P-201ENST00000363016 102 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 Y_RNA.142-201ENST00000363491 102 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 RNA5SP387-201ENST00000364226 106 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 SNORA70.4-201ENST00000365509 134 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 MIR93-201ENST00000385024 80 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 RPL7P60-201ENST00000397636 735 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 SSXP10-201ENST00000402595 565 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 AL049697.2-201ENST00000403708 294 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 PDCL2P1-201ENST00000419302 352 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 UQCRBP1-201ENST00000421129 336 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 RPL7AP25-201ENST00000423357 805 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 RPL23AP25-201ENST00000430973 463 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 EZH2P1-201ENST00000431167 291 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 RPL23AP30-201ENST00000432419 501 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 AC073587.1-201ENST00000447093 876 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 RNU6-261P-201ENST00000459506 102 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 AC010469.1-201ENST00000463864 576 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 AC108145.1-201ENST00000503770 153 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 RNA5SP337-201ENST00000517007 109 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 IGKV1-32-201ENST00000519290 311 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 PHBP17-201ENST00000528576 541 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 OR5B19P-201ENST00000531766 928 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 AC018638.8-201ENST00000588755 281 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 AC008782.1-201ENST00000603386 430 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 AC135507.2-201ENST00000612443 309 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 OR51H2P-202ENST00000641424 3046 ntBASIC5.05□□□□□ -1.6
CHAMP1Q96JM3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 RNU6-845P-201ENST00000362578 103 ntBASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 RNU6-1097P-201ENST00000363586 107 ntBASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 AL445189.1-201ENST00000405722 338 ntBASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 RNU6-1068P-201ENST00000410958 103 ntBASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 AC004987.3-201ENST00000413879 771 ntBASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 RPS27AP12-201ENST00000429552 465 ntBASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 AC105402.2-201ENST00000438503 358 ntBASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 AC010618.1-201ENST00000469924 477 ntBASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 AC020593.1-201ENST00000507399 299 ntBASIC5.04□□□□□ -1.6
CHAMP1Q96JM3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms