Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
IFT43Q96FT9 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.6□□□□□ -1.51
IFT43Q96FT9 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
IFT43Q96FT9 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
IFT43Q96FT9 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
IFT43Q96FT9 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
IFT43Q96FT9 Y_RNA.307-201ENST00000365022 117 ntBASIC5.6□□□□□ -1.51
IFT43Q96FT9 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
IFT43Q96FT9 Y_RNA.428-201ENST00000384078 102 ntBASIC5.6□□□□□ -1.51
IFT43Q96FT9 Y_RNA.496-201ENST00000384444 101 ntBASIC5.6□□□□□ -1.51
IFT43Q96FT9 RNU6-1026P-201ENST00000384465 108 ntBASIC5.6□□□□□ -1.51
IFT43Q96FT9 MT-TC-201ENST00000387405 66 ntBASIC5.6□□□□□ -1.51
IFT43Q96FT9 RNU6-1109P-201ENST00000391187 107 ntBASIC5.6□□□□□ -1.51
IFT43Q96FT9 Y_RNA.645-201ENST00000391229 102 ntBASIC5.6□□□□□ -1.51
IFT43Q96FT9 AC009804.1-201ENST00000400949 179 ntBASIC5.6□□□□□ -1.51
IFT43Q96FT9 RNU4-34P-201ENST00000410431 124 ntBASIC5.6□□□□□ -1.51
IFT43Q96FT9 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.6□□□□□ -1.51
IFT43Q96FT9 AL669831.1-202ENST00000428504 417 ntBASIC5.6□□□□□ -1.51
IFT43Q96FT9 HIGD1AP11-201ENST00000438361 280 ntBASIC5.6□□□□□ -1.51
IFT43Q96FT9 SUMO1P3-201ENST00000439961 304 ntBASIC5.6□□□□□ -1.51
IFT43Q96FT9 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.6□□□□□ -1.51
IFT43Q96FT9 AC008481.1-201ENST00000463278 396 ntBASIC5.6□□□□□ -1.51
IFT43Q96FT9 RN7SL799P-201ENST00000475891 298 ntBASIC5.6□□□□□ -1.51
IFT43Q96FT9 AC021146.3-201ENST00000511911 260 ntBASIC5.6□□□□□ -1.51
IFT43Q96FT9 RNU6-1332P-201ENST00000516666 104 ntBASIC5.6□□□□□ -1.51
IFT43Q96FT9 RN7SKP277-201ENST00000516895 283 ntBASIC5.6□□□□□ -1.51
IFT43Q96FT9 SNORD116.3-201ENST00000517176 78 ntBASIC5.6□□□□□ -1.51
IFT43Q96FT9 AC103783.1-201ENST00000520506 373 ntBASIC5.6□□□□□ -1.51
IFT43Q96FT9 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.6□□□□□ -1.51
IFT43Q96FT9 AP000827.1-201ENST00000527814 258 ntBASIC5.6□□□□□ -1.51
IFT43Q96FT9 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.6□□□□□ -1.51
IFT43Q96FT9 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.6□□□□□ -1.51
IFT43Q96FT9 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.6□□□□□ -1.51
IFT43Q96FT9 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.6□□□□□ -1.51
IFT43Q96FT9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.6□□□□□ -1.51
IFT43Q96FT9 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
IFT43Q96FT9 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.6□□□□□ -1.51
IFT43Q96FT9 AC104687.2-201ENST00000604442 342 ntBASIC5.6□□□□□ -1.51
IFT43Q96FT9 AC020634.1-201ENST00000608701 549 ntBASIC5.6□□□□□ -1.51
IFT43Q96FT9 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
IFT43Q96FT9 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
IFT43Q96FT9 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.6□□□□□ -1.51
IFT43Q96FT9 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
IFT43Q96FT9 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
IFT43Q96FT9 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
IFT43Q96FT9 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
IFT43Q96FT9 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
IFT43Q96FT9 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.6□□□□□ -1.51
IFT43Q96FT9 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.59□□□□□ -1.51
IFT43Q96FT9 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.59□□□□□ -1.51
IFT43Q96FT9 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.59□□□□□ -1.51
IFT43Q96FT9 AC027287.1-201ENST00000553115 1453 ntBASIC5.59□□□□□ -1.51
IFT43Q96FT9 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
IFT43Q96FT9 AC006206.1-201ENST00000544842 3387 ntBASIC5.59□□□□□ -1.51
IFT43Q96FT9 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.59□□□□□ -1.51
IFT43Q96FT9 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.59□□□□□ -1.51
IFT43Q96FT9 AC007938.2-201ENST00000604666 2634 ntBASIC5.59□□□□□ -1.51
IFT43Q96FT9 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
IFT43Q96FT9 DDX10P1-201ENST00000448545 1933 ntBASIC5.59□□□□□ -1.51
IFT43Q96FT9 RNU6-701P-201ENST00000384059 107 ntBASIC5.59□□□□□ -1.51
IFT43Q96FT9 Y_RNA.473-201ENST00000384333 102 ntBASIC5.59□□□□□ -1.51
IFT43Q96FT9 Y_RNA.493-201ENST00000384422 102 ntBASIC5.59□□□□□ -1.51
IFT43Q96FT9 SNORD56.6-201ENST00000384569 71 ntBASIC5.59□□□□□ -1.51
IFT43Q96FT9 RNA5SP111-201ENST00000411386 101 ntBASIC5.59□□□□□ -1.51
IFT43Q96FT9 AC007161.1-204ENST00000423039 460 ntBASIC5.59□□□□□ -1.51
IFT43Q96FT9 AL590632.1-201ENST00000424289 371 ntBASIC5.59□□□□□ -1.51
IFT43Q96FT9 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.59□□□□□ -1.51
IFT43Q96FT9 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.59□□□□□ -1.51
IFT43Q96FT9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.59□□□□□ -1.51
IFT43Q96FT9 OR6D1P-201ENST00000436165 939 ntBASIC5.59□□□□□ -1.51
IFT43Q96FT9 MTCO3P45-201ENST00000443036 613 ntBASIC5.59□□□□□ -1.51
IFT43Q96FT9 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.59□□□□□ -1.51
IFT43Q96FT9 GAPDHP27-201ENST00000447427 1020 ntBASIC5.59□□□□□ -1.51
IFT43Q96FT9 AL162389.1-201ENST00000449233 177 ntBASIC5.59□□□□□ -1.51
IFT43Q96FT9 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.59□□□□□ -1.51
IFT43Q96FT9 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.59□□□□□ -1.51
IFT43Q96FT9 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.59□□□□□ -1.51
IFT43Q96FT9 COX6B1P2-201ENST00000489624 230 ntBASIC5.59□□□□□ -1.51
IFT43Q96FT9 RN7SL547P-201ENST00000490793 290 ntBASIC5.59□□□□□ -1.51
IFT43Q96FT9 RNU2-69P-201ENST00000516061 100 ntBASIC5.59□□□□□ -1.51
IFT43Q96FT9 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.59□□□□□ -1.51
IFT43Q96FT9 FKBP1AP1-201ENST00000594588 318 ntBASIC5.59□□□□□ -1.51
IFT43Q96FT9 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.59□□□□□ -1.51
IFT43Q96FT9 AL158032.1-201ENST00000605401 106 ntBASIC5.59□□□□□ -1.51
IFT43Q96FT9 AC211433.2-201ENST00000608433 387 ntBASIC5.59□□□□□ -1.51
IFT43Q96FT9 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.59□□□□□ -1.51
IFT43Q96FT9 AC010632.3-201ENST00000611377 369 ntBASIC5.59□□□□□ -1.51
IFT43Q96FT9 AC007998.5-201ENST00000622938 237 ntBASIC5.59□□□□□ -1.51
IFT43Q96FT9 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.59□□□□□ -1.51
IFT43Q96FT9 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
IFT43Q96FT9 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
IFT43Q96FT9 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
IFT43Q96FT9 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.59□□□□□ -1.51
IFT43Q96FT9 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
IFT43Q96FT9 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
IFT43Q96FT9 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
IFT43Q96FT9 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
IFT43Q96FT9 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.59□□□□□ -1.52
IFT43Q96FT9 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.58□□□□□ -1.52
IFT43Q96FT9 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms