Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.61□□□□□ -1.51
TRIM11Q96F44 AC127024.6-201ENST00000621598 424 ntBASIC5.61□□□□□ -1.51
TRIM11Q96F44 AL357559.1-201ENST00000622228 274 ntBASIC5.61□□□□□ -1.51
TRIM11Q96F44 AL445363.3-201ENST00000623080 671 ntBASIC5.61□□□□□ -1.51
TRIM11Q96F44 AC127459.3-201ENST00000624328 466 ntBASIC5.61□□□□□ -1.51
TRIM11Q96F44 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM11Q96F44 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TRIM11Q96F44 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM11Q96F44 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
TRIM11Q96F44 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
TRIM11Q96F44 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM11Q96F44 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TRIM11Q96F44 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
TRIM11Q96F44 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM11Q96F44 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
TRIM11Q96F44 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
TRIM11Q96F44 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM11Q96F44 RNU6-179P-201ENST00000363350 107 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 RNA5SP335-201ENST00000363817 110 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 RNU5A-8P-201ENST00000364102 114 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 Y_RNA.214-201ENST00000364201 112 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 RN7SKP124-201ENST00000364730 341 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 RNA5SP223-201ENST00000365174 120 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM11Q96F44 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM11Q96F44 AC110754.1-201ENST00000399740 601 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 AC008280.1-201ENST00000418851 412 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM11Q96F44 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM11Q96F44 DNAJC19P7-201ENST00000428811 344 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 AL390119.1-201ENST00000440329 312 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 AL031584.1-201ENST00000447169 754 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 NOP56P2-201ENST00000447491 769 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 HMGB3P21-201ENST00000452483 547 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 AC092647.2-201ENST00000452998 253 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 RN7SL189P-201ENST00000468631 289 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 AP000893.1-201ENST00000474462 794 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM11Q96F44 AC011411.1-201ENST00000509592 876 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 AC006427.1-201ENST00000514359 712 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 RNU6-1212P-201ENST00000517023 104 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.6□□□□□ -1.51
TRIM11Q96F44 SETP2-201ENST00000553886 926 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 AC022884.2-201ENST00000578535 580 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM11Q96F44 AC006557.5-201ENST00000603126 811 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 AL138825.1-201ENST00000618587 192 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 MIR8080-201ENST00000622224 89 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM11Q96F44 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM11Q96F44 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM11Q96F44 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM11Q96F44 CASC19-204ENST00000641001 2055 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM11Q96F44 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
TRIM11Q96F44 AC011460.1-201ENST00000636268 1834 ntBASIC5.6□□□□□ -1.51
TRIM11Q96F44 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM11Q96F44 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM11Q96F44 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
TRIM11Q96F44 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM11Q96F44 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM11Q96F44 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM11Q96F44 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
TRIM11Q96F44 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TRIM11Q96F44 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM11Q96F44 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TRIM11Q96F44 RNU6-28P-201ENST00000362378 107 ntBASIC5.59□□□□□ -1.51
TRIM11Q96F44 RN7SKP95-201ENST00000362860 303 ntBASIC5.59□□□□□ -1.51
TRIM11Q96F44 RNU6-280P-201ENST00000364145 104 ntBASIC5.59□□□□□ -1.51
TRIM11Q96F44 RNU6-128P-201ENST00000383976 107 ntBASIC5.59□□□□□ -1.51
TRIM11Q96F44 MIR105-1-201ENST00000385222 81 ntBASIC5.59□□□□□ -1.51
TRIM11Q96F44 AL133384.1-201ENST00000412744 351 ntBASIC5.59□□□□□ -1.51
TRIM11Q96F44 GSTM3P2-201ENST00000412746 530 ntBASIC5.59□□□□□ -1.51
TRIM11Q96F44 AL451074.5-201ENST00000415894 435 ntBASIC5.59□□□□□ -1.51
TRIM11Q96F44 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM11Q96F44 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM11Q96F44 AC108734.1-201ENST00000439549 399 ntBASIC5.59□□□□□ -1.51
TRIM11Q96F44 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM11Q96F44 AC243772.1-201ENST00000451620 410 ntBASIC5.59□□□□□ -1.51
TRIM11Q96F44 ENPP7P11-201ENST00000505915 627 ntBASIC5.59□□□□□ -1.51
TRIM11Q96F44 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM11Q96F44 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.59□□□□□ -1.51
TRIM11Q96F44 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM11Q96F44 AC022404.1-201ENST00000555320 273 ntBASIC5.59□□□□□ -1.51
TRIM11Q96F44 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM11Q96F44 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM11Q96F44 AC084783.1-201ENST00000565846 910 ntBASIC5.59□□□□□ -1.51
TRIM11Q96F44 AC130289.1-201ENST00000577321 73 ntBASIC5.59□□□□□ -1.51
TRIM11Q96F44 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM11Q96F44 AC060771.1-201ENST00000582031 164 ntBASIC5.59□□□□□ -1.51
TRIM11Q96F44 AC005899.2-201ENST00000584353 90 ntBASIC5.59□□□□□ -1.51
TRIM11Q96F44 AC008521.2-201ENST00000591021 259 ntBASIC5.59□□□□□ -1.51
TRIM11Q96F44 RNF138P2-201ENST00000603490 592 ntBASIC5.59□□□□□ -1.51
TRIM11Q96F44 RNA5SP440-201ENST00000612665 119 ntBASIC5.59□□□□□ -1.51
TRIM11Q96F44 DUSP12P1-201ENST00000612874 516 ntBASIC5.59□□□□□ -1.51
TRIM11Q96F44 RN7SL787P-201ENST00000613000 284 ntBASIC5.59□□□□□ -1.51
TRIM11Q96F44 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM11Q96F44 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM11Q96F44 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM11Q96F44 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms