Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 AC106782.4-201ENST00000568264 210 ntBASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 AC011816.2-201ENST00000607089 556 ntBASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 RNU6-87P-201ENST00000607561 108 ntBASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 AC098614.4-201ENST00000607601 462 ntBASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 AL590099.1-201ENST00000615276 138 ntBASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 AC072046.2-201ENST00000618366 268 ntBASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 AC110994.2-201ENST00000635481 492 ntBASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 NOL8P1-201ENST00000508336 3529 ntBASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 RNU6-837P-201ENST00000391056 108 ntBASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 AC006548.1-201ENST00000427470 102 ntBASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 RABEPKP1-201ENST00000440529 1026 ntBASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 RPL17P49-201ENST00000443728 411 ntBASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 AL133162.1-201ENST00000463228 453 ntBASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 TMED11P-201ENST00000479478 690 ntBASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 RPL29P14-201ENST00000495837 428 ntBASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 AC108145.1-201ENST00000503770 153 ntBASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 VWA8P1-201ENST00000510889 176 ntBASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 AC022616.6-201ENST00000520479 119 ntBASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 SETP7-201ENST00000552169 453 ntBASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 AC009101.1-201ENST00000568135 242 ntBASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 RPL23AP87-202ENST00000573039 466 ntBASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 IGHV3-29-201ENST00000604817 344 ntBASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 AL365503.1-201ENST00000605247 905 ntBASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 AC055876.5-201ENST00000605667 259 ntBASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 AC026368.1-201ENST00000614934 690 ntBASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 AC009159.1-201ENST00000618386 642 ntBASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 AC006065.5-201ENST00000623427 349 ntBASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 CR381572.1-201ENST00000625098 102 ntBASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 FARSBP1-201ENST00000435808 1778 ntBASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 Z82217.1-201ENST00000625157 8149 ntBASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM43Q96BQ3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 RNY4P34-201ENST00000364779 95 ntBASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 U1.1-201ENST00000384101 164 ntBASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 MRPL42P2-201ENST00000403169 426 ntBASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 AL139247.1-201ENST00000422768 325 ntBASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 AL353777.1-201ENST00000425552 326 ntBASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 MTCO3P30-201ENST00000426425 670 ntBASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 C8orf59P1-201ENST00000429930 303 ntBASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 AC104308.1-201ENST00000454621 333 ntBASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM43Q96BQ3 RPL23AP41-201ENST00000484754 458 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms