Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 HIGD1AP1-201ENST00000550979 275 ntBASIC3.28□□□□□ -1.88
PTP4A1Q93096 AC023161.2-201ENST00000551218 780 ntBASIC3.28□□□□□ -1.88
PTP4A1Q93096 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.28□□□□□ -1.88
PTP4A1Q93096 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.28□□□□□ -1.88
PTP4A1Q93096 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.28□□□□□ -1.88
PTP4A1Q93096 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.28□□□□□ -1.88
PTP4A1Q93096 VN1R85P-201ENST00000601587 426 ntBASIC3.28□□□□□ -1.88
PTP4A1Q93096 AL596327.1-201ENST00000603629 213 ntBASIC3.28□□□□□ -1.88
PTP4A1Q93096 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.28□□□□□ -1.88
PTP4A1Q93096 NUTF2P8-201ENST00000604593 363 ntBASIC3.28□□□□□ -1.88
PTP4A1Q93096 RNU1-30P-201ENST00000606575 163 ntBASIC3.28□□□□□ -1.88
PTP4A1Q93096 AC024941.1-201ENST00000612250 334 ntBASIC3.28□□□□□ -1.88
PTP4A1Q93096 AC068831.8-201ENST00000620171 435 ntBASIC3.28□□□□□ -1.88
PTP4A1Q93096 FP236240.3-201ENST00000623061 327 ntBASIC3.28□□□□□ -1.88
PTP4A1Q93096 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.28□□□□□ -1.88
PTP4A1Q93096 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.28□□□□□ -1.88
PTP4A1Q93096 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PTP4A1Q93096 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PTP4A1Q93096 MTND5P27-201ENST00000428871 1720 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PTP4A1Q93096 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PTP4A1Q93096 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PTP4A1Q93096 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PTP4A1Q93096 RNU6-462P-201ENST00000362659 105 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 RNU6-223P-201ENST00000362830 107 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 RNU6-744P-201ENST00000365557 107 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 RNU6-805P-201ENST00000365643 106 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PTP4A1Q93096 RNU6-1316P-201ENST00000384242 108 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 AL136116.1-201ENST00000403591 381 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.27□□□□□ -1.89
PTP4A1Q93096 RPL23AP82-202ENST00000427528 469 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.27□□□□□ -1.89
PTP4A1Q93096 AC004854.1-201ENST00000440356 349 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 MTND3P1-201ENST00000441336 220 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 SETD6P1-201ENST00000444575 317 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.27□□□□□ -1.89
PTP4A1Q93096 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.27□□□□□ -1.89
PTP4A1Q93096 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.27□□□□□ -1.89
PTP4A1Q93096 AC093392.2-201ENST00000450682 337 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 SNRPGP6-201ENST00000451124 220 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 AL109741.2-201ENST00000455561 343 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.27□□□□□ -1.89
PTP4A1Q93096 AC034222.1-201ENST00000494052 532 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 AC147055.4-201ENST00000504399 745 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 FABP5P12-201ENST00000515543 389 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 RNU6-1282P-201ENST00000516735 96 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 RNA5SP291-201ENST00000517222 105 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 AP006245.1-201ENST00000522549 120 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.27□□□□□ -1.89
PTP4A1Q93096 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.27□□□□□ -1.89
PTP4A1Q93096 OR4H12P-201ENST00000556269 907 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 HMGB1P6-201ENST00000569046 646 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.27□□□□□ -1.89
PTP4A1Q93096 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PTP4A1Q93096 MTND1P8-201ENST00000571424 950 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 MIR5685-201ENST00000579080 79 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 AC006116.10-201ENST00000591836 581 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 AC112220.3-201ENST00000605502 502 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 AC005344.1-201ENST00000613391 459 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 AC013476.2-201ENST00000614456 459 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 AL161629.2-201ENST00000615347 275 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 AC006386.1-201ENST00000619436 415 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 AC022960.3-201ENST00000619794 441 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 AL732618.1-201ENST00000623251 301 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.27□□□□□ -1.89
PTP4A1Q93096 AC009039.2-201ENST00000624524 529 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 OR5H6-203ENST00000642105 978 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 AP004289.2-201ENST00000444413 1457 ntBASIC3.27□□□□□ -1.89
PTP4A1Q93096 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.26□□□□□ -1.89
PTP4A1Q93096 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PTP4A1Q93096 AC022336.2-201ENST00000568966 2538 ntBASIC3.26□□□□□ -1.89
PTP4A1Q93096 ZNF29P-201ENST00000225587 168 ntBASIC3.26□□□□□ -1.89
PTP4A1Q93096 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
PTP4A1Q93096 RNU5E-8P-201ENST00000363502 116 ntBASIC3.26□□□□□ -1.89
PTP4A1Q93096 RNU6-289P-201ENST00000364093 107 ntBASIC3.26□□□□□ -1.89
PTP4A1Q93096 SNORA36C-201ENST00000384289 132 ntBASIC3.26□□□□□ -1.89
PTP4A1Q93096 SNORA57.1-201ENST00000391227 145 ntBASIC3.26□□□□□ -1.89
PTP4A1Q93096 RPL21P17-201ENST00000397467 475 ntBASIC3.26□□□□□ -1.89
PTP4A1Q93096 RPS7P13-201ENST00000413955 498 ntBASIC3.26□□□□□ -1.89
PTP4A1Q93096 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.26□□□□□ -1.89
PTP4A1Q93096 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.26□□□□□ -1.89
PTP4A1Q93096 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.26□□□□□ -1.89
PTP4A1Q93096 COX7BP2-201ENST00000437976 242 ntBASIC3.26□□□□□ -1.89
PTP4A1Q93096 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.26□□□□□ -1.89
PTP4A1Q93096 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.26□□□□□ -1.89
PTP4A1Q93096 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.26□□□□□ -1.89
PTP4A1Q93096 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.26□□□□□ -1.89
PTP4A1Q93096 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.26□□□□□ -1.89
PTP4A1Q93096 NPM1P41-201ENST00000512920 831 ntBASIC3.26□□□□□ -1.89
PTP4A1Q93096 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.26□□□□□ -1.89
PTP4A1Q93096 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.26□□□□□ -1.89
PTP4A1Q93096 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.26□□□□□ -1.89
PTP4A1Q93096 AL355836.1-201ENST00000555951 870 ntBASIC3.26□□□□□ -1.89
PTP4A1Q93096 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.26□□□□□ -1.89
PTP4A1Q93096 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.26□□□□□ -1.89
PTP4A1Q93096 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.26□□□□□ -1.89
PTP4A1Q93096 AL391001.1-201ENST00000602747 715 ntBASIC3.26□□□□□ -1.89
PTP4A1Q93096 AC004852.3-201ENST00000614131 326 ntBASIC3.26□□□□□ -1.89
PTP4A1Q93096 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms