Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.18□□□□□ -1.58
BRF1Q92994 SUB1P1-201ENST00000524415 382 ntBASIC5.18□□□□□ -1.58
BRF1Q92994 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC5.18□□□□□ -1.58
BRF1Q92994 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.18□□□□□ -1.58
BRF1Q92994 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.18□□□□□ -1.58
BRF1Q92994 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.18□□□□□ -1.58
BRF1Q92994 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.18□□□□□ -1.58
BRF1Q92994 AC022432.1-201ENST00000595739 310 ntBASIC5.18□□□□□ -1.58
BRF1Q92994 AC010591.1-201ENST00000603941 649 ntBASIC5.18□□□□□ -1.58
BRF1Q92994 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.18□□□□□ -1.58
BRF1Q92994 AL138721.1-201ENST00000616756 179 ntBASIC5.18□□□□□ -1.58
BRF1Q92994 AC009248.2-201ENST00000619826 254 ntBASIC5.18□□□□□ -1.58
BRF1Q92994 AL159972.1-201ENST00000625150 448 ntBASIC5.18□□□□□ -1.58
BRF1Q92994 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.18□□□□□ -1.58
BRF1Q92994 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
BRF1Q92994 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.18□□□□□ -1.58
BRF1Q92994 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
BRF1Q92994 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
BRF1Q92994 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
BRF1Q92994 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
BRF1Q92994 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BRF1Q92994 LINC01355-201ENST00000566551 5444 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BRF1Q92994 OR4G1P-203ENST00000641984 1631 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BRF1Q92994 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.17□□□□□ -1.58
BRF1Q92994 AC067945.1-201ENST00000342609 618 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 RNU4-44P-201ENST00000363050 141 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 SNORD82-201ENST00000365530 70 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.17□□□□□ -1.58
BRF1Q92994 MIR129-1-201ENST00000384972 72 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
BRF1Q92994 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BRF1Q92994 AL590004.1-201ENST00000405321 300 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.17□□□□□ -1.58
BRF1Q92994 AC009161.1-201ENST00000417306 376 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.17□□□□□ -1.58
BRF1Q92994 RPS20P5-201ENST00000434808 360 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.17□□□□□ -1.58
BRF1Q92994 MRPL50P4-201ENST00000446432 475 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 PPIAP21-201ENST00000464473 501 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 GMFBP1-201ENST00000467831 427 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 AC010683.1-201ENST00000473673 378 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 HMGN1P10-201ENST00000474557 553 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 EIF4EP3-201ENST00000498782 656 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.17□□□□□ -1.58
BRF1Q92994 AC110792.2-201ENST00000510278 224 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 AC105417.1-201ENST00000514691 285 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 RNU6-277P-201ENST00000516272 106 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 AC008694.2-201ENST00000517591 306 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 AC087241.2-201ENST00000535801 324 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.17□□□□□ -1.58
BRF1Q92994 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.17□□□□□ -1.58
BRF1Q92994 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.17□□□□□ -1.58
BRF1Q92994 GLUD1P4-201ENST00000590914 418 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 AC243960.4-201ENST00000600532 288 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 YWHAQP7-201ENST00000603536 658 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 Y_RNA.812-201ENST00000610788 101 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 Y_RNA.784-201ENST00000613803 101 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 Y_RNA.787-201ENST00000616522 101 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 Y_RNA.780-201ENST00000617336 101 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 Y_RNA.801-201ENST00000619005 101 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 AC005858.4-201ENST00000623191 700 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BRF1Q92994 AC012618.3-205ENST00000637896 1496 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.17□□□□□ -1.58
BRF1Q92994 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BRF1Q92994 OR56B2P-202ENST00000641377 2453 ntBASIC5.17□□□□□ -1.58
BRF1Q92994 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BRF1Q92994 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BRF1Q92994 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
BRF1Q92994 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BRF1Q92994 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
BRF1Q92994 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.16□□□□□ -1.58
BRF1Q92994 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
BRF1Q92994 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.16□□□□□ -1.58
BRF1Q92994 RNU5A-8P-201ENST00000364102 114 ntBASIC5.16□□□□□ -1.58
BRF1Q92994 RNU4-48P-201ENST00000365559 182 ntBASIC5.16□□□□□ -1.58
BRF1Q92994 Y_RNA.431-201ENST00000384086 102 ntBASIC5.16□□□□□ -1.58
BRF1Q92994 MIR3065-201ENST00000390137 79 ntBASIC5.16□□□□□ -1.58
BRF1Q92994 AC097374.1-203ENST00000400783 485 ntBASIC5.16□□□□□ -1.58
BRF1Q92994 MIR1911-201ENST00000410783 80 ntBASIC5.16□□□□□ -1.58
BRF1Q92994 RNU2-62P-201ENST00000410868 191 ntBASIC5.16□□□□□ -1.58
BRF1Q92994 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BRF1Q92994 RPS26P47-201ENST00000427219 348 ntBASIC5.16□□□□□ -1.58
BRF1Q92994 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.16□□□□□ -1.58
BRF1Q92994 AC233279.1-201ENST00000455300 423 ntBASIC5.16□□□□□ -1.58
BRF1Q92994 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.16□□□□□ -1.58
BRF1Q92994 SNORD121B-201ENST00000458838 81 ntBASIC5.16□□□□□ -1.58
BRF1Q92994 RPS20P21-201ENST00000466859 343 ntBASIC5.16□□□□□ -1.58
BRF1Q92994 AC022034.3-201ENST00000471393 478 ntBASIC5.16□□□□□ -1.58
BRF1Q92994 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.16□□□□□ -1.58
BRF1Q92994 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.16□□□□□ -1.58
BRF1Q92994 FTH1P21-201ENST00000512179 511 ntBASIC5.16□□□□□ -1.58
BRF1Q92994 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.16□□□□□ -1.58
BRF1Q92994 AC016065.2-201ENST00000514530 444 ntBASIC5.16□□□□□ -1.58
BRF1Q92994 RN7SKP92-201ENST00000517266 244 ntBASIC5.16□□□□□ -1.58
BRF1Q92994 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC5.16□□□□□ -1.58
BRF1Q92994 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.16□□□□□ -1.58
BRF1Q92994 AL355375.2-201ENST00000574825 175 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms