Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 MIR1294-201ENST00000408503 142 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 RNU2-2P-201ENST00000410396 191 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 U2.15-201ENST00000611544 191 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 U2.16-201ENST00000613119 191 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 U2.12-201ENST00000613778 191 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 U2.20-201ENST00000613956 192 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 U2.9-201ENST00000615427 191 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 U2.11-201ENST00000616345 191 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 U2.2-201ENST00000616535 191 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 U2.3-201ENST00000617785 191 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 U2.19-201ENST00000618602 191 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 RNU2-1-201ENST00000618664 191 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 U2.6-201ENST00000619225 191 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 U2.5-201ENST00000619465 191 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 U2.10-201ENST00000620268 191 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 MIR6767-201ENST00000637302 66 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 FARSBP1-201ENST00000435808 1778 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 RNA5SP146-201ENST00000410743 123 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 RNA5SP31-201ENST00000411144 127 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 IFNNP1-201ENST00000429219 553 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 RPL12P18-201ENST00000437175 325 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 AL138787.1-202ENST00000437804 898 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 Y_RNA.654-201ENST00000497848 106 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 AL356266.1-201ENST00000623311 483 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 AC022795.1-201ENST00000473808 480 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 CYCSP2-201ENST00000558168 301 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 AC090286.3-201ENST00000573133 187 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 FAT1P1-201ENST00000406588 507 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 AC023825.1-201ENST00000566704 1030 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 AC006111.3-201ENST00000622137 383 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 PNPT1P2-201ENST00000456768 2050 ntBASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
SYNE2Q8WXH0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 RNU4-51P-201ENST00000364206 140 ntBASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 RNU6-48P-201ENST00000384161 107 ntBASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 AC234781.2-201ENST00000426370 994 ntBASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 RPL21P6-201ENST00000479171 504 ntBASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 HAUS1P1-201ENST00000505275 832 ntBASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 AP000254.1-201ENST00000609934 520 ntBASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 RNU6-39P-201ENST00000384344 107 ntBASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 EIF5P1-201ENST00000400019 1231 ntBASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 MIR1271-201ENST00000408537 86 ntBASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 MRPS36P1-201ENST00000421291 307 ntBASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 AL355493.4-201ENST00000618530 292 ntBASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 RNU6-288P-201ENST00000363690 104 ntBASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 BNIP3P2-201ENST00000441221 577 ntBASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 SNORD114-27-201ENST00000363766 70 ntBASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 AL359643.1-201ENST00000404109 423 ntBASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 RNA5SP134-201ENST00000516492 96 ntBASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 AC135776.4-201ENST00000624300 1904 ntBASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 MTND5P30-201ENST00000452896 1731 ntBASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 RNA5SP354-201ENST00000391247 136 ntBASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 B3GALNT1P1-201ENST00000420569 975 ntBASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 ARL4AP2-201ENST00000507378 601 ntBASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 Y_RNA.18-201ENST00000362461 102 ntBASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC0.88□□□□□ -2.27
SYNE2Q8WXH0 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms