Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SLC44A1Q8WWI5 AC024560.2-201ENST00000507981 1497 ntBASIC3.66□□□□□ -1.82
SLC44A1Q8WWI5 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
SLC44A1Q8WWI5 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.66□□□□□ -1.82
SLC44A1Q8WWI5 AC007656.2-201ENST00000624902 4547 ntBASIC3.65□□□□□ -1.82
SLC44A1Q8WWI5 AC068647.1-201ENST00000489539 2265 ntBASIC3.65□□□□□ -1.82
SLC44A1Q8WWI5 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 RNU6-289P-201ENST00000364093 107 ntBASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 Y_RNA.318-201ENST00000365131 97 ntBASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 RN7SKP27-201ENST00000410684 333 ntBASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 RPL36AP36-201ENST00000418616 301 ntBASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 OR8F1P-201ENST00000425243 930 ntBASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 AC010153.1-201ENST00000432862 727 ntBASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 LSM1P1-201ENST00000438629 273 ntBASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 RPS29P7-201ENST00000439662 171 ntBASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 AC239367.2-201ENST00000447309 705 ntBASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 EPS15P1-201ENST00000448836 336 ntBASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 TPTE2P5-203ENST00000458118 728 ntBASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 AP000873.1-201ENST00000463987 400 ntBASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 AC017015.1-201ENST00000477387 286 ntBASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 AC034105.4-201ENST00000568304 277 ntBASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 MIR544B-201ENST00000582372 78 ntBASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 AC053481.4-201ENST00000583164 216 ntBASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 AC093227.2-201ENST00000589357 285 ntBASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 AL669831.4-202ENST00000590817 238 ntBASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 BNIP3P23-201ENST00000599655 511 ntBASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 BCRP9-201ENST00000605312 388 ntBASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 RNU1-30P-201ENST00000606575 163 ntBASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
SLC44A1Q8WWI5 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 MTND4P4-201ENST00000439033 1366 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 RNU6-28P-201ENST00000362378 107 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 RNU5F-6P-201ENST00000362979 116 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 U3.4-201ENST00000363352 213 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 SNORD51-201ENST00000384320 80 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 RNU6-769P-201ENST00000384407 104 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 RNU6-821P-201ENST00000390995 107 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 AL445189.1-201ENST00000405722 338 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 U3.39-201ENST00000408569 239 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 RNU2-15P-201ENST00000410692 191 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 AC109583.1-201ENST00000432156 268 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 RPL37P21-201ENST00000435890 276 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 HMGN2P21-201ENST00000447764 270 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 HMGB1P15-201ENST00000453854 435 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 snoU109.4-201ENST00000458953 143 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 VN1R105P-201ENST00000486595 910 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 RN7SL323P-201ENST00000494712 295 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 AC010460.1-201ENST00000507087 466 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 AC013828.2-201ENST00000532487 235 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 EEF1B2P4-201ENST00000551398 348 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 AC012414.6-201ENST00000568241 401 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 RN7SL703P-201ENST00000578485 302 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 AC083760.1-201ENST00000589621 670 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 AC073544.2-201ENST00000601155 540 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 U73023.1-201ENST00000603134 700 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 AL606490.9-201ENST00000603331 271 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 AC006254.3-201ENST00000603353 884 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 AL391497.1-201ENST00000608671 547 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 AC084782.3-201ENST00000612282 578 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 AC022149.2-201ENST00000621061 203 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 FP236240.3-201ENST00000623061 327 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 AC138649.5-201ENST00000637456 137 ntBASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.64□□□□□ -1.83
SLC44A1Q8WWI5 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms