Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC092013.1-201ENST00000438795 332 ntBASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 DYNLT3P2-201ENST00000442517 295 ntBASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 OSTCP8-201ENST00000445117 448 ntBASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 AC005297.2-201ENST00000450430 606 ntBASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 SNORD127-201ENST00000458892 86 ntBASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 MTND1P19-201ENST00000511780 315 ntBASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 SNORD116.3-201ENST00000517176 78 ntBASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 AL137161.1-201ENST00000532231 390 ntBASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 MIR3667-201ENST00000581025 74 ntBASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 AC011477.5-201ENST00000586571 259 ntBASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 AC009229.3-201ENST00000608056 282 ntBASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 AL159972.1-201ENST00000625150 448 ntBASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 AC005005.4-201ENST00000623789 16698 ntBASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.26□□□□□ -1.57
SHKBP1Q8TBC3 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AL731566.1-201ENST00000620490 1937 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AC090220.1-201ENST00000593078 1699 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 MFSD8-216ENST00000641147 4009 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AC100778.3-201ENST00000580060 1750 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AC010615.1-201ENST00000594254 1764 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 RNU6-28P-201ENST00000362378 107 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 RNA5SP191-201ENST00000362585 102 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 Y_RNA.380-201ENST00000365663 111 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 SNORA2.3-201ENST00000383920 135 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 Y_RNA.428-201ENST00000384078 102 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 Y_RNA.555-201ENST00000384673 110 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AL109755.1-201ENST00000401791 649 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 SNORA77-201ENST00000408716 125 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AL133384.1-201ENST00000412744 351 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 SNAP23P1-201ENST00000433229 246 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 RPL19P16-201ENST00000433839 588 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 RPL23AP89-201ENST00000439324 255 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 RPL21P133-201ENST00000443666 476 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AP000893.1-201ENST00000474462 794 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 RPL7AP10-201ENST00000481016 791 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AC116337.1-201ENST00000509680 687 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 RNU6-475P-201ENST00000516073 104 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 RNU6-1023P-201ENST00000516137 106 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AC100784.1-201ENST00000522790 310 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AC131281.1-201ENST00000522984 164 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AC135001.1-201ENST00000544546 283 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 OR11H5P-201ENST00000554039 926 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AC234771.5-201ENST00000600161 514 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AC092447.9-201ENST00000603395 144 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AL031666.3-201ENST00000609320 1006 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AP001486.3-201ENST00000615334 372 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AP000346.3-201ENST00000622821 210 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AC011155.2-201ENST00000623202 216 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AC233263.6-201ENST00000631132 1963 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 AL672167.1-204ENST00000641875 3017 ntBASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHKBP1Q8TBC3 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHKBP1Q8TBC3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms