Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 AL355596.1-201ENST00000565399 3996 ntBASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 OR5T3-201ENST00000303059 1023 ntBASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 SNORD56.4-201ENST00000363883 71 ntBASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 RNA5SP354-201ENST00000391247 136 ntBASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 AL139095.1-201ENST00000404326 391 ntBASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 AL138885.1-201ENST00000405921 675 ntBASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 RNU6-193P-201ENST00000410977 107 ntBASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 AL592148.1-201ENST00000413568 445 ntBASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 ZFAND6P1-201ENST00000434138 605 ntBASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 AC112653.1-201ENST00000443851 386 ntBASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 MRPL50P4-201ENST00000446432 475 ntBASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 AC008716.1-201ENST00000511084 513 ntBASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 RNU6-1095P-201ENST00000516148 108 ntBASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 SNORA74D-201ENST00000516404 141 ntBASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 IGJP1-201ENST00000522682 475 ntBASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 AC124293.1-201ENST00000530034 493 ntBASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 H3F3AP1-201ENST00000559984 334 ntBASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 AC040174.2-201ENST00000602701 465 ntBASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 AC010738.1-201ENST00000604970 987 ntBASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 AC012443.1-201ENST00000605605 231 ntBASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 AL450270.1-201ENST00000606160 391 ntBASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 AC100814.1-201ENST00000606963 623 ntBASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 AC006213.5-201ENST00000619673 288 ntBASIC2.67□□□□□ -1.98
CLHC1Q8NHS4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 RNA5SP393-201ENST00000363423 117 ntBASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 SET-203ENST00000372688 801 ntTSL 2 BASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 AL512633.1-201ENST00000399931 655 ntBASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 AL023807.1-201ENST00000407932 359 ntBASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 SUMO1P4-201ENST00000429430 302 ntBASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 RPS20P5-201ENST00000434808 360 ntBASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 AC092170.1-201ENST00000440211 356 ntBASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 PABPC1P3-201ENST00000469174 459 ntBASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 AP000852.1-201ENST00000472460 573 ntBASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 AC108729.2-201ENST00000476543 840 ntBASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 NAMPTP2-201ENST00000505629 1115 ntBASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 RNU6-416P-201ENST00000516265 103 ntBASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 MIR5194-201ENST00000582634 120 ntBASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 AL160281.1-201ENST00000605307 311 ntBASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 AC079791.1-201ENST00000605356 973 ntBASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 AC112503.2-201ENST00000609005 552 ntBASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 AC009318.4-201ENST00000620496 486 ntBASIC2.66□□□□□ -1.98
CLHC1Q8NHS4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
CLHC1Q8NHS4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
CLHC1Q8NHS4 NUP58P1-201ENST00000502546 1738 ntBASIC2.65□□□□□ -1.98
CLHC1Q8NHS4 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 RNU6-198P-201ENST00000384258 104 ntBASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 VN1R42P-201ENST00000424651 344 ntBASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 RPL7L1P10-201ENST00000427790 463 ntBASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 AC012497.1-201ENST00000429392 575 ntBASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 AL513043.1-201ENST00000439124 535 ntBASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 AL929288.2-201ENST00000446368 407 ntBASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 MTND2P3-201ENST00000452458 470 ntBASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 PNPLA4P1-201ENST00000458328 305 ntBASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 AP001992.1-205ENST00000462248 379 ntBASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 RPL9P33-201ENST00000484311 566 ntBASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 AC010374.2-201ENST00000512933 535 ntBASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 SNORA9.3-201ENST00000516383 129 ntBASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 AC009163.5-201ENST00000575421 637 ntBASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 KATNBL1P5-201ENST00000605015 517 ntBASIC2.65□□□□□ -1.99
CLHC1Q8NHS4 AL162274.2-201ENST00000614406 332 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms