Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC104090.1-201ENST00000506341 1171 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AC006499.2-201ENST00000513470 337 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 RNU5A-4P-201ENST00000516588 111 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 SCARNA20.6-201ENST00000517251 106 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 HSPA8P13-201ENST00000523715 472 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AC024224.1-201ENST00000538284 609 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AC023050.2-201ENST00000544968 387 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 MIR5004-201ENST00000579078 107 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 MIR5195-201ENST00000583555 115 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AC008507.1-201ENST00000587506 734 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AC004987.4-201ENST00000603383 338 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AC128687.1-201ENST00000605304 619 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AC013244.3-201ENST00000605614 388 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AC026790.2-201ENST00000606282 430 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AC245297.2-201ENST00000610119 565 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AC011330.2-201ENST00000621680 635 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AC004009.2-201ENST00000623016 728 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AC026422.1-201ENST00000623961 452 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AC244517.1-201ENST00000606030 2086 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 AF117829.1-206ENST00000621883 3802 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 SNORA31-201ENST00000362607 130 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 RNA5SP383-201ENST00000362934 120 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 RNU4-28P-201ENST00000364739 141 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 SNORD51-201ENST00000384320 80 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 MIR607-201ENST00000385241 96 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 HMGB1P17-201ENST00000403495 628 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 RNU6-757P-201ENST00000410334 100 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 RPS24P7-201ENST00000416921 246 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 XKRYP1-201ENST00000423438 492 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 AC019178.2-201ENST00000423595 505 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 XKRYP2-201ENST00000432915 492 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 ISCA1P2-201ENST00000438679 421 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 ELOCP23-201ENST00000452014 332 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 snoU109.4-201ENST00000458953 143 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 AC097493.1-201ENST00000463958 372 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 KCTD9P5-201ENST00000504141 1170 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 AC034244.1-201ENST00000507687 207 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 AC006390.1-201ENST00000508068 283 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 RNU2-58P-201ENST00000516403 183 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 OR5D17P-201ENST00000531492 978 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 AL121603.1-201ENST00000553815 142 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 AC022022.2-201ENST00000602989 360 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 XIAPP1-201ENST00000603162 600 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 AC025588.2-201ENST00000604851 466 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 AC055876.5-201ENST00000605667 259 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 AL355816.2-201ENST00000610049 647 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 AC138932.5-201ENST00000617759 563 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 AC091903.1-201ENST00000624322 454 ntBASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.95□□□□□ -1.94
C9orf40Q8IXQ3 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 RNU6-157P-201ENST00000383957 107 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.94□□□□□ -1.94
C9orf40Q8IXQ3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms