Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC104090.1-201ENST00000506341 1171 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 XKRY-201ENST00000510392 1100 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 RNA5SP341-201ENST00000516261 117 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 RN7SKP244-201ENST00000516513 307 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 MTCYBP41-201ENST00000528913 1123 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 DUXAP1-201ENST00000556632 463 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 AC087465.1-201ENST00000560574 245 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 AL354943.1-201ENST00000572103 781 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 MIR3186-201ENST00000577404 85 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 AC011471.1-201ENST00000585766 187 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 BNIP3P11-201ENST00000603878 563 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 AC011468.4-201ENST00000603942 409 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 IGHV3-29-201ENST00000604817 344 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 AL355493.4-201ENST00000618530 292 ntBASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC60Q8IWA6 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 RNU6-1214P-201ENST00000363650 109 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 RNU6-335P-201ENST00000364563 113 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 RNU6-730P-201ENST00000383954 104 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 RPL23AP29-201ENST00000397284 453 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 AL138880.1-201ENST00000405824 642 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 MTND1P32-201ENST00000433043 938 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 MTCYBP35-201ENST00000503630 1137 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 HMGB3P15-201ENST00000507326 574 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 AC008885.1-201ENST00000514930 301 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 SCARNA20.6-201ENST00000517251 106 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 OR5AK1P-201ENST00000524837 922 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 AP003385.6-201ENST00000531603 374 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 AL121603.1-201ENST00000553815 142 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 MIR4637-201ENST00000582405 84 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 AL669831.4-202ENST00000590817 238 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 BNIP3P24-201ENST00000593398 557 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 VN1R82P-201ENST00000601481 356 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 AC006539.2-201ENST00000601729 572 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 AL031281.1-201ENST00000604049 488 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 PRELID3BP8-201ENST00000604148 295 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 AC245297.2-201ENST00000610119 565 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 AP002791.1-201ENST00000623291 381 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 AC231657.1-201ENST00000624313 397 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 MTND5P24-201ENST00000438892 1767 ntBASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CCDC60Q8IWA6 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
CCDC60Q8IWA6 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 RPL23AP57-201ENST00000332361 466 ntBASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 MIR422A-201ENST00000362286 90 ntBASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 RNU6-989P-201ENST00000362756 107 ntBASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 SNORA54-201ENST00000384281 123 ntBASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 RNU6-328P-201ENST00000390887 106 ntBASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 AL121972.1-201ENST00000402023 252 ntBASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 NDUFB4P4-201ENST00000404822 243 ntBASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 AC096664.2-201ENST00000411843 406 ntBASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 AC005005.2-201ENST00000420779 380 ntBASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 RSL24D1P3-201ENST00000449255 495 ntBASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 AC006539.3-201ENST00000454258 129 ntBASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 AL139824.2-201ENST00000458731 1095 ntBASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 AC026410.2-201ENST00000460281 156 ntBASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 RPL27AP5-201ENST00000469428 449 ntBASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 RPS4XP13-201ENST00000483219 789 ntBASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 RPL7P23-201ENST00000493874 747 ntBASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 TMEM251P1-201ENST00000503717 318 ntBASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 AC093281.2-201ENST00000510153 597 ntBASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 AC104986.1-201ENST00000517978 436 ntBASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CCDC60Q8IWA6 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms