Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC71Q8IV32 RNU4-35P-201ENST00000362588 141 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 RNU1-33P-201ENST00000364249 162 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC71Q8IV32 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
CCDC71Q8IV32 RNA5SP120-201ENST00000410900 112 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 RNA5SP107-201ENST00000411358 122 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AC126124.2-201ENST00000413542 321 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 HSFY4P-201ENST00000415994 1181 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 MTCYBP38-201ENST00000417160 1123 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AC244098.2-201ENST00000422068 99 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AL513174.1-201ENST00000423182 629 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AC092447.3-201ENST00000426027 686 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 RPL23AP82-202ENST00000427528 469 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 ATP5JP1-201ENST00000431631 322 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AC125238.1-201ENST00000448842 249 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC71Q8IV32 RPS20P24-201ENST00000457473 361 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 HMGN1P18-201ENST00000457642 277 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AL139824.2-201ENST00000458731 1095 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 CENPBD1P1-201ENST00000464061 469 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 SYPL1P1-201ENST00000473622 768 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC71Q8IV32 TMEM251P1-201ENST00000503717 318 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
CCDC71Q8IV32 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC71Q8IV32 SNORA70.19-201ENST00000516717 90 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AC026407.1-201ENST00000518369 204 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AP003461.1-201ENST00000528866 78 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AC009094.1-201ENST00000564443 426 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AC011471.1-201ENST00000585766 187 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 BNIP3P11-201ENST00000603878 563 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AL031281.1-201ENST00000604049 488 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AC005000.2-201ENST00000605468 310 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 MIR7851-201ENST00000610611 160 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AC025588.4-201ENST00000615802 908 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AC231657.1-201ENST00000624313 397 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC71Q8IV32 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC71Q8IV32 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CCDC71Q8IV32 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC71Q8IV32 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC71Q8IV32 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AC104454.1-201ENST00000421341 1401 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 AP002907.1-201ENST00000606361 1430 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 OR4G11P-202ENST00000642116 1414 ntBASIC3.18□□□□□ -1.9
CCDC71Q8IV32 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC71Q8IV32 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC71Q8IV32 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
CCDC71Q8IV32 SNORA31-201ENST00000362607 130 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 RNU6-989P-201ENST00000362756 107 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 SNORD56.3-201ENST00000363507 71 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 RNU6-931P-201ENST00000363850 107 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 RNU6-821P-201ENST00000390995 107 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 RNU6-837P-201ENST00000391056 108 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 U3.29-201ENST00000391296 212 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.17□□□□□ -1.9
CCDC71Q8IV32 AL121972.1-201ENST00000402023 252 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 USP9YP33-201ENST00000412220 421 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 BX323014.1-201ENST00000412876 237 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 USP9YP35-201ENST00000435696 412 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 YWHAZP7-201ENST00000436906 631 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 AL008629.1-201ENST00000438615 184 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC71Q8IV32 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC71Q8IV32 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC71Q8IV32 USP9YP10-201ENST00000454868 628 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 MTCO3P11-201ENST00000455103 774 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC71Q8IV32 RPS27P29-201ENST00000463110 252 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 AC004263.1-201ENST00000479327 332 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC71Q8IV32 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC71Q8IV32 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC71Q8IV32 TXNP6-201ENST00000510190 310 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 SCARNA20.6-201ENST00000517251 106 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC71Q8IV32 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC71Q8IV32 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC71Q8IV32 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.17□□□□□ -1.9
CCDC71Q8IV32 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC71Q8IV32 CYCSP2-201ENST00000558168 301 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 MAGOH2P-202ENST00000584384 429 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.17□□□□□ -1.9
CCDC71Q8IV32 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC71Q8IV32 VN1R92P-201ENST00000598511 928 ntBASIC3.17□□□□□ -1.9
CCDC71Q8IV32 AC007490.1-201ENST00000624321 703 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms