Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC017083.1-201ENST00000428093 483 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.7□□□□□ -1.82
PRPF39Q86UA1 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.7□□□□□ -1.82
PRPF39Q86UA1 OR4K11P-201ENST00000431829 904 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.7□□□□□ -1.82
PRPF39Q86UA1 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.7□□□□□ -1.82
PRPF39Q86UA1 SETP5-201ENST00000437270 562 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.7□□□□□ -1.82
PRPF39Q86UA1 PRDX3P3-201ENST00000447765 522 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 AC099563.1-201ENST00000456086 418 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 RN7SL293P-201ENST00000481765 281 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 HMGB1P36-201ENST00000487709 576 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.7□□□□□ -1.82
PRPF39Q86UA1 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.7□□□□□ -1.82
PRPF39Q86UA1 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.7□□□□□ -1.82
PRPF39Q86UA1 MTND5P4-201ENST00000514978 288 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 ERHP1-201ENST00000523006 310 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 UBTFL10-201ENST00000528532 562 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.7□□□□□ -1.82
PRPF39Q86UA1 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.7□□□□□ -1.82
PRPF39Q86UA1 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.7□□□□□ -1.82
PRPF39Q86UA1 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.7□□□□□ -1.82
PRPF39Q86UA1 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.7□□□□□ -1.82
PRPF39Q86UA1 AC009097.3-201ENST00000563557 1018 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 MIR4425-201ENST00000580572 84 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.7□□□□□ -1.82
PRPF39Q86UA1 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.7□□□□□ -1.82
PRPF39Q86UA1 AP001429.1-201ENST00000602568 530 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.7□□□□□ -1.82
PRPF39Q86UA1 MIR8058-201ENST00000615737 89 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRPF39Q86UA1 XIST_intron.1-201ENST00000619444 68 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 PLCE1P1-201ENST00000622094 305 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 AC243312.2-201ENST00000623340 601 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 AC119674.1-207ENST00000641355 633 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.7□□□□□ -1.82
PRPF39Q86UA1 MTCO1P12-201ENST00000414273 1543 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 AC005832.2-201ENST00000538921 1430 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
PRPF39Q86UA1 AC092326.2-201ENST00000624772 1561 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 AC002546.1-201ENST00000588041 2504 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.69□□□□□ -1.82
PRPF39Q86UA1 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PRPF39Q86UA1 RNU6-931P-201ENST00000363850 107 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 RNU6-777P-201ENST00000364265 104 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PRPF39Q86UA1 MIR493-201ENST00000385254 89 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 RN7SKP285-201ENST00000410137 318 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 AC068533.1-201ENST00000418542 415 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.69□□□□□ -1.82
PRPF39Q86UA1 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.69□□□□□ -1.82
PRPF39Q86UA1 TXNL1P1-201ENST00000429528 554 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.69□□□□□ -1.82
PRPF39Q86UA1 RPL17P49-201ENST00000443728 411 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.69□□□□□ -1.82
PRPF39Q86UA1 MRPS31P2-201ENST00000451581 518 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 CYCSP35-201ENST00000451978 304 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 AC092754.2-201ENST00000463506 460 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 AC084357.1-201ENST00000473404 255 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 AC021382.1-201ENST00000483523 359 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 FCF1P3-201ENST00000496394 590 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.69□□□□□ -1.82
PRPF39Q86UA1 AC026784.1-201ENST00000507986 352 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.69□□□□□ -1.82
PRPF39Q86UA1 IGKV2-23-201ENST00000518729 323 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.69□□□□□ -1.82
PRPF39Q86UA1 AC022690.1-201ENST00000526681 550 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 OR5B10P-201ENST00000532869 642 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.69□□□□□ -1.82
PRPF39Q86UA1 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.69□□□□□ -1.82
PRPF39Q86UA1 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.69□□□□□ -1.82
PRPF39Q86UA1 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.69□□□□□ -1.82
PRPF39Q86UA1 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.69□□□□□ -1.82
PRPF39Q86UA1 AC008962.1-201ENST00000605729 304 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 RMST_8.1-201ENST00000610287 165 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 AL139418.1-201ENST00000613613 177 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PRPF39Q86UA1 AL136164.4-201ENST00000625013 2135 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 AC244258.1-201ENST00000637553 1071 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 AC009812.4-201ENST00000569134 1805 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 AC087359.1-201ENST00000508335 1740 ntBASIC3.69□□□□□ -1.82
PRPF39Q86UA1 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PRPF39Q86UA1 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRPF39Q86UA1 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRPF39Q86UA1 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.69□□□□□ -1.82
PRPF39Q86UA1 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AC138915.3-201ENST00000562908 1389 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 RPL7P26-201ENST00000333817 754 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 RNU6-1078P-201ENST00000364522 103 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 RNU6-359P-201ENST00000365466 108 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 MIR591-201ENST00000385290 95 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AL159169.1-201ENST00000421119 127 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 XKRYP1-201ENST00000423438 492 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.68□□□□□ -1.82
PRPF39Q86UA1 XKRYP2-201ENST00000432915 492 ntBASIC3.68□□□□□ -1.82
PRPF39Q86UA1 AL354941.1-201ENST00000438600 464 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 209.4 ms