Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 SCARNA20.4-201ENST00000516969 131 ntBASIC6.18□□□□□ -1.42
SH3RF1Q7Z6J0 AC025423.5-201ENST00000550230 219 ntBASIC6.18□□□□□ -1.42
SH3RF1Q7Z6J0 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC6.18□□□□□ -1.42
SH3RF1Q7Z6J0 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC6.18□□□□□ -1.42
SH3RF1Q7Z6J0 RPL23AP84-201ENST00000571193 464 ntBASIC6.18□□□□□ -1.42
SH3RF1Q7Z6J0 MIR4330-201ENST00000579077 105 ntBASIC6.18□□□□□ -1.42
SH3RF1Q7Z6J0 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.18□□□□□ -1.42
SH3RF1Q7Z6J0 AL158032.1-201ENST00000605401 106 ntBASIC6.18□□□□□ -1.42
SH3RF1Q7Z6J0 SDR42E1P2-201ENST00000614861 481 ntBASIC6.18□□□□□ -1.42
SH3RF1Q7Z6J0 AL359547.2-201ENST00000615810 418 ntBASIC6.18□□□□□ -1.42
SH3RF1Q7Z6J0 SDR42E1P4-201ENST00000620894 481 ntBASIC6.18□□□□□ -1.42
SH3RF1Q7Z6J0 AL589994.2-201ENST00000621124 579 ntBASIC6.18□□□□□ -1.42
SH3RF1Q7Z6J0 AL161637.1-201ENST00000622380 412 ntBASIC6.18□□□□□ -1.42
SH3RF1Q7Z6J0 PABPC1P7-201ENST00000413177 1513 ntBASIC6.18□□□□□ -1.42
SH3RF1Q7Z6J0 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
SH3RF1Q7Z6J0 AP001029.2-203ENST00000589795 4910 ntBASIC6.18□□□□□ -1.42
SH3RF1Q7Z6J0 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SH3RF1Q7Z6J0 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SH3RF1Q7Z6J0 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SH3RF1Q7Z6J0 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.18□□□□□ -1.42
SH3RF1Q7Z6J0 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
SH3RF1Q7Z6J0 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 AC093775.1-201ENST00000624154 1868 ntBASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 RNA5SP391-201ENST00000363456 119 ntBASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 Y_RNA.214-201ENST00000364201 112 ntBASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 Y_RNA.551-201ENST00000384661 102 ntBASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 AC011005.2-201ENST00000487324 359 ntBASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 SNORA81.3-201ENST00000517283 198 ntBASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 AC092470.1-201ENST00000546187 132 ntBASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 AC109446.1-201ENST00000566172 220 ntBASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 MIR4675-201ENST00000577898 77 ntBASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 MIR5188-201ENST00000583467 113 ntBASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 PSMA6P4-201ENST00000603247 718 ntBASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 AC010201.1-201ENST00000605051 540 ntBASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 AC087783.2-201ENST00000605070 562 ntBASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 AC073869.8-201ENST00000641806 335 ntBASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 AL591135.1-201ENST00000401578 5914 ntBASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 AP002512.4-202ENST00000641599 4530 ntBASIC6.17□□□□□ -1.42
SH3RF1Q7Z6J0 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 AC008669.1-201ENST00000565823 2178 ntBASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 MIR133B-201ENST00000362210 119 ntBASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 RNU6-1159P-201ENST00000362933 107 ntBASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 RNU6-715P-201ENST00000365204 103 ntBASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 SNORA16A-201ENST00000384342 137 ntBASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 RPL12P17-201ENST00000432393 498 ntBASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 AC090804.1-201ENST00000448870 490 ntBASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 AC022431.1-201ENST00000450941 438 ntBASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 AC013470.1-201ENST00000453438 462 ntBASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 AC084198.1-201ENST00000477747 402 ntBASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 PPP1R11P1-201ENST00000486095 376 ntBASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 RPL17P19-201ENST00000489069 552 ntBASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 IGLV2-34-201ENST00000490007 283 ntBASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 AP001086.1-201ENST00000494882 321 ntBASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 AC083829.1-201ENST00000503756 657 ntBASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 RNU6-111P-201ENST00000517179 105 ntBASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 MIR3133-201ENST00000583157 78 ntBASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 AC108738.1-201ENST00000603703 237 ntBASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SH3RF1Q7Z6J0 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms