Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 BX276092.3-201ENST00000424182 230 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 SETP5-201ENST00000437270 562 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 RBMY2TP-201ENST00000451162 947 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 GEMIN2P1-201ENST00000454246 752 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 RNU7-169P-201ENST00000459456 61 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 AC096745.1-201ENST00000509945 370 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 AC093853.1-201ENST00000515689 483 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 RN7SKP147-201ENST00000517154 244 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 AC027369.5-201ENST00000533838 755 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 AP002770.2-201ENST00000543613 532 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 AL049779.2-201ENST00000553847 315 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 PRPF19P1-201ENST00000584766 898 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 OR7E18P-201ENST00000592589 702 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 AL451044.1-201ENST00000604867 238 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 AL136131.3-201ENST00000607600 188 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 AL596245.1-201ENST00000618994 362 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 AC022031.1-201ENST00000585985 2593 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
FOXR1Q6PIV2 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
FOXR1Q6PIV2 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
FOXR1Q6PIV2 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.49
FOXR1Q6PIV2 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
FOXR1Q6PIV2 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
FOXR1Q6PIV2 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.49
FOXR1Q6PIV2 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
FOXR1Q6PIV2 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 AC005005.4-201ENST00000623789 16698 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 DDX18P3-201ENST00000404856 2007 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 SELENOWP1-201ENST00000322792 252 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 MIR215-201ENST00000384858 110 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 DBIP1-201ENST00000401435 260 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 AL603910.2-201ENST00000407268 136 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 RNU2-25P-201ENST00000411041 191 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 FAR2P4-202ENST00000425399 584 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 AC092162.1-201ENST00000432828 434 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 AC016696.1-201ENST00000446949 318 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 AL031274.1-201ENST00000450334 232 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 AL138752.1-201ENST00000452964 351 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 TRBV26-201ENST00000456572 344 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 RNU7-187P-201ENST00000458985 68 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 RN7SL610P-201ENST00000463845 291 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 AC026801.1-201ENST00000497178 464 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 AC067942.3-201ENST00000512025 362 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 AC107393.1-201ENST00000512403 346 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 Y_RNA.683-201ENST00000516508 93 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 RNU6-798P-201ENST00000516912 103 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 AC004024.1-201ENST00000549244 247 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 AC012443.1-201ENST00000605605 231 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 RNU6-84P-201ENST00000607737 102 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 AL159153.1-201ENST00000619688 317 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 AL353662.3-201ENST00000625131 237 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 AL450472.1-202ENST00000637286 180 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 AL122126.1-201ENST00000546905 1318 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 CASC19-284ENST00000642142 1868 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 AL022311.1-201ENST00000623726 19416 ntBASIC5.71□□□□□ -1.5
FOXR1Q6PIV2 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 PCAT14-202ENST00000627127 3935 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 NXPH1-205ENST00000602349 1953 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 Y_RNA.84-201ENST00000363011 104 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 Y_RNA.151-201ENST00000363566 112 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms