Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 RNA5SP118-201ENST00000410385 109 ntBASIC1.22□□□□□ -2.21
UBR4Q5T4S7 SNX3P1X-201ENST00000414887 175 ntBASIC1.22□□□□□ -2.21
UBR4Q5T4S7 AL590762.3-201ENST00000436372 640 ntBASIC1.22□□□□□ -2.21
UBR4Q5T4S7 CLIC4P1-201ENST00000453177 535 ntBASIC1.22□□□□□ -2.21
UBR4Q5T4S7 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 MRPL50P4-201ENST00000446432 475 ntBASIC1.22□□□□□ -2.21
UBR4Q5T4S7 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 AF131216.2-201ENST00000512316 564 ntBASIC1.22□□□□□ -2.21
UBR4Q5T4S7 AC105429.2-201ENST00000610567 517 ntBASIC1.22□□□□□ -2.21
UBR4Q5T4S7 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 ZNF33CP-201ENST00000432492 2030 ntBASIC1.22□□□□□ -2.21
UBR4Q5T4S7 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 AL138787.1-202ENST00000437804 898 ntBASIC1.22□□□□□ -2.21
UBR4Q5T4S7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 LDHBP3-201ENST00000514909 822 ntBASIC1.22□□□□□ -2.21
UBR4Q5T4S7 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 AC010338.1-201ENST00000621823 717 ntBASIC1.22□□□□□ -2.21
UBR4Q5T4S7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 AL121834.1-202ENST00000404494 277 ntBASIC1.21□□□□□ -2.21
UBR4Q5T4S7 RPL12P18-201ENST00000437175 325 ntBASIC1.21□□□□□ -2.21
UBR4Q5T4S7 BX322784.1-201ENST00000455793 1077 ntBASIC1.21□□□□□ -2.21
UBR4Q5T4S7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
UBR4Q5T4S7 AL627390.1-201ENST00000396055 340 ntBASIC1.21□□□□□ -2.22
UBR4Q5T4S7 AL358453.1-201ENST00000422522 250 ntBASIC1.21□□□□□ -2.22
UBR4Q5T4S7 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC1.21□□□□□ -2.22
UBR4Q5T4S7 AL161713.1-201ENST00000555538 145 ntBASIC1.21□□□□□ -2.22
UBR4Q5T4S7 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC1.21□□□□□ -2.22
UBR4Q5T4S7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
UBR4Q5T4S7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
UBR4Q5T4S7 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
UBR4Q5T4S7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
UBR4Q5T4S7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
UBR4Q5T4S7 Y_RNA.412-201ENST00000384001 104 ntBASIC1.21□□□□□ -2.22
UBR4Q5T4S7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.21□□□□□ -2.22
UBR4Q5T4S7 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.21□□□□□ -2.22
UBR4Q5T4S7 AC022795.1-201ENST00000473808 480 ntBASIC1.21□□□□□ -2.22
UBR4Q5T4S7 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.21□□□□□ -2.22
UBR4Q5T4S7 AC008507.1-201ENST00000587506 734 ntBASIC1.21□□□□□ -2.22
UBR4Q5T4S7 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC1.21□□□□□ -2.22
UBR4Q5T4S7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
UBR4Q5T4S7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
UBR4Q5T4S7 XPOTP1-201ENST00000443317 2398 ntBASIC1.21□□□□□ -2.22
UBR4Q5T4S7 SNORD56.3-201ENST00000363507 71 ntBASIC1.21□□□□□ -2.22
UBR4Q5T4S7 VN1R31P-201ENST00000417498 730 ntBASIC1.21□□□□□ -2.22
UBR4Q5T4S7 AL353706.1-201ENST00000436728 494 ntBASIC1.21□□□□□ -2.22
UBR4Q5T4S7 RPL23AP55-201ENST00000498163 452 ntBASIC1.21□□□□□ -2.22
UBR4Q5T4S7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.21□□□□□ -2.22
UBR4Q5T4S7 AC245166.1-201ENST00000521012 253 ntBASIC1.21□□□□□ -2.22
UBR4Q5T4S7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
UBR4Q5T4S7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.2□□□□□ -2.22
UBR4Q5T4S7 OR1AB1P-201ENST00000585564 761 ntBASIC1.2□□□□□ -2.22
UBR4Q5T4S7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.2□□□□□ -2.22
UBR4Q5T4S7 Y_RNA.783-201ENST00000613546 102 ntBASIC1.2□□□□□ -2.22
UBR4Q5T4S7 CR381653.2-201ENST00000624041 768 ntBASIC1.2□□□□□ -2.22
UBR4Q5T4S7 AC109315.1-201ENST00000584143 1347 ntBASIC1.2□□□□□ -2.22
UBR4Q5T4S7 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
UBR4Q5T4S7 RNU6-173P-201ENST00000364215 104 ntBASIC1.2□□□□□ -2.22
UBR4Q5T4S7 RN7SKP226-201ENST00000364912 300 ntBASIC1.2□□□□□ -2.22
UBR4Q5T4S7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.2□□□□□ -2.22
UBR4Q5T4S7 AC068657.1-201ENST00000520807 306 ntBASIC1.2□□□□□ -2.22
UBR4Q5T4S7 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
UBR4Q5T4S7 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
UBR4Q5T4S7 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC1.2□□□□□ -2.22
UBR4Q5T4S7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
UBR4Q5T4S7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
UBR4Q5T4S7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.2□□□□□ -2.22
UBR4Q5T4S7 RPL21P41-201ENST00000459863 264 ntBASIC1.2□□□□□ -2.22
UBR4Q5T4S7 AC093278.1-201ENST00000494700 600 ntBASIC1.2□□□□□ -2.22
UBR4Q5T4S7 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.2□□□□□ -2.22
UBR4Q5T4S7 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.2□□□□□ -2.22
UBR4Q5T4S7 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
UBR4Q5T4S7 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC1.2□□□□□ -2.22
UBR4Q5T4S7 AP000254.1-201ENST00000609934 520 ntBASIC1.2□□□□□ -2.22
UBR4Q5T4S7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
UBR4Q5T4S7 Y_RNA.280-201ENST00000364765 112 ntBASIC1.2□□□□□ -2.22
UBR4Q5T4S7 OR52A4P-203ENST00000498233 1014 ntBASIC1.2□□□□□ -2.22
UBR4Q5T4S7 AC104090.1-201ENST00000506341 1171 ntBASIC1.2□□□□□ -2.22
UBR4Q5T4S7 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC1.2□□□□□ -2.22
UBR4Q5T4S7 RNA5SP217-201ENST00000515959 91 ntBASIC1.2□□□□□ -2.22
UBR4Q5T4S7 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.2□□□□□ -2.22
UBR4Q5T4S7 AC116158.1-201ENST00000560231 2129 ntBASIC1.2□□□□□ -2.22
UBR4Q5T4S7 AC090115.4-201ENST00000609970 188 ntBASIC1.2□□□□□ -2.22
UBR4Q5T4S7 MIR8087-201ENST00000612745 78 ntBASIC1.2□□□□□ -2.22
UBR4Q5T4S7 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.2□□□□□ -2.22
UBR4Q5T4S7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 Y_RNA.18-201ENST00000362461 102 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 ZNF603P-201ENST00000405613 487 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AL162578.1-201ENST00000406202 378 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AC092427.1-202ENST00000430569 476 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms