Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 AC090151.1-201ENST00000520784 730 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 AC125611.2-201ENST00000551907 647 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 AC124947.2-202ENST00000552735 133 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 AC025884.1-201ENST00000556034 378 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 RPL21P12-201ENST00000559810 515 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 FAM60BP-201ENST00000578364 658 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 AL139286.1-201ENST00000604465 483 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 AC244100.1-202ENST00000621554 382 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 AC112200.1-201ENST00000625015 234 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 MIR6863-201ENST00000636112 90 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 PNPT1P2-201ENST00000456768 2050 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 RN7SKP44-201ENST00000363602 316 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 RNU6-1284P-201ENST00000363701 100 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 MTCO3P40-201ENST00000392516 676 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 RN7SKP177-201ENST00000410567 355 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 RPL23AP26-201ENST00000412728 464 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 RPL21P24-201ENST00000413752 448 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 PPP1R11P2-201ENST00000423543 382 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 MTCO2P11-201ENST00000431069 680 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 AC002486.1-201ENST00000435098 391 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 AL451074.3-201ENST00000437709 472 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 MTCO3P45-201ENST00000443036 613 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 RPL7P19-201ENST00000469948 618 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 AC023598.1-201ENST00000472521 361 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 RPS27AP1-201ENST00000475545 471 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 RPL35P6-201ENST00000490024 372 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 AC110792.1-201ENST00000491826 472 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 AC079382.1-201ENST00000493346 557 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 AC114797.1-201ENST00000514003 728 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 RNU6-64P-201ENST00000517119 105 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 CCNG2P1-201ENST00000549521 1000 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 AC012443.1-201ENST00000605605 231 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 AC091905.1-201ENST00000624400 311 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 LRRC77P-213ENST00000637727 880 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 AC139713.2-215ENST00000641428 5037 ntBASIC5.11□□□□□ -1.59
CCDC144BQ3MJ40 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 HSPE1P11-201ENST00000339579 310 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 Y_RNA.1-201ENST00000352915 104 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 RNU6-169P-201ENST00000365336 107 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 RNA5SP366-201ENST00000365454 123 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 RNU6-108P-201ENST00000365558 107 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 MIR607-201ENST00000385241 96 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 RPS26P8-201ENST00000393490 348 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 AC007283.2-201ENST00000424739 197 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 GPR143P-201ENST00000434155 205 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 AC114755.5-201ENST00000447760 831 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 AL359073.1-201ENST00000448036 403 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 snoU13.4-201ENST00000458916 104 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 SNORD97-201ENST00000459187 142 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 UQCRHP4-201ENST00000471686 272 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 AC139769.1-204ENST00000472297 1931 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 AP000926.1-201ENST00000479573 241 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 RPL31P13-201ENST00000484151 370 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms