Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 AC108734.3-201ENST00000481241 1165 ntBASIC4.11□□□□□ -1.75
CCDC96Q2M329 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC96Q2M329 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC96Q2M329 WBP1LP4-201ENST00000505043 344 ntBASIC4.11□□□□□ -1.75
CCDC96Q2M329 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC96Q2M329 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC96Q2M329 AC116353.3-201ENST00000511215 249 ntBASIC4.11□□□□□ -1.75
CCDC96Q2M329 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC96Q2M329 RNU6-1095P-201ENST00000516148 108 ntBASIC4.11□□□□□ -1.75
CCDC96Q2M329 SNORD59.2-201ENST00000516873 68 ntBASIC4.11□□□□□ -1.75
CCDC96Q2M329 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC96Q2M329 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC96Q2M329 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC96Q2M329 FAM60BP-201ENST00000578364 658 ntBASIC4.11□□□□□ -1.75
CCDC96Q2M329 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC96Q2M329 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC96Q2M329 AC012669.1-201ENST00000603209 283 ntBASIC4.11□□□□□ -1.75
CCDC96Q2M329 AC073348.1-201ENST00000623002 331 ntBASIC4.11□□□□□ -1.75
CCDC96Q2M329 AC078883.4-201ENST00000623218 367 ntBASIC4.11□□□□□ -1.75
CCDC96Q2M329 AC026422.1-201ENST00000623961 452 ntBASIC4.11□□□□□ -1.75
CCDC96Q2M329 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC96Q2M329 MKKS-204ENST00000639674 192 ntBASIC4.11□□□□□ -1.75
CCDC96Q2M329 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC96Q2M329 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC96Q2M329 SRP72P2-201ENST00000344851 1979 ntBASIC4.11□□□□□ -1.75
CCDC96Q2M329 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC96Q2M329 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC96Q2M329 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC96Q2M329 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC96Q2M329 RNA5SP72-201ENST00000364442 117 ntBASIC4.1□□□□□ -1.75
CCDC96Q2M329 SNORD116-2-201ENST00000384274 95 ntBASIC4.1□□□□□ -1.75
CCDC96Q2M329 SNORD116-6-201ENST00000384711 96 ntBASIC4.1□□□□□ -1.75
CCDC96Q2M329 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC96Q2M329 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC96Q2M329 GLRXP1-201ENST00000423261 334 ntBASIC4.1□□□□□ -1.75
CCDC96Q2M329 AP000907.1-201ENST00000428428 510 ntBASIC4.1□□□□□ -1.75
CCDC96Q2M329 RPL21P40-201ENST00000428586 483 ntBASIC4.1□□□□□ -1.75
CCDC96Q2M329 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC96Q2M329 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC96Q2M329 YWHAZP7-201ENST00000436906 631 ntBASIC4.1□□□□□ -1.75
CCDC96Q2M329 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC96Q2M329 AL121871.1-201ENST00000443413 436 ntBASIC4.1□□□□□ -1.75
CCDC96Q2M329 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC96Q2M329 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC96Q2M329 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC96Q2M329 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC96Q2M329 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC96Q2M329 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC96Q2M329 AC093278.1-201ENST00000494700 600 ntBASIC4.1□□□□□ -1.75
CCDC96Q2M329 AC074250.1-201ENST00000511117 192 ntBASIC4.1□□□□□ -1.75
CCDC96Q2M329 AC010486.3-201ENST00000511602 785 ntBASIC4.1□□□□□ -1.75
CCDC96Q2M329 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC96Q2M329 RNU6-1225P-201ENST00000516336 65 ntBASIC4.1□□□□□ -1.75
CCDC96Q2M329 Y_RNA.688-201ENST00000516565 95 ntBASIC4.1□□□□□ -1.75
CCDC96Q2M329 RNU6-579P-201ENST00000516879 102 ntBASIC4.1□□□□□ -1.75
CCDC96Q2M329 RNU6-711P-201ENST00000517255 106 ntBASIC4.1□□□□□ -1.75
CCDC96Q2M329 AC105185.1-201ENST00000518705 535 ntBASIC4.1□□□□□ -1.75
CCDC96Q2M329 AP001804.3-201ENST00000525146 880 ntBASIC4.1□□□□□ -1.75
CCDC96Q2M329 GTF2IP8-201ENST00000560687 584 ntBASIC4.1□□□□□ -1.75
CCDC96Q2M329 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC96Q2M329 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC96Q2M329 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC96Q2M329 MIR7975-201ENST00000619350 68 ntBASIC4.1□□□□□ -1.75
CCDC96Q2M329 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCDC96Q2M329 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC96Q2M329 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC96Q2M329 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC96Q2M329 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
CCDC96Q2M329 Y_RNA.169-201ENST00000363745 96 ntBASIC4.09□□□□□ -1.75
CCDC96Q2M329 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC96Q2M329 MIR34B-201ENST00000385076 84 ntBASIC4.09□□□□□ -1.75
CCDC96Q2M329 RNU4-72P-201ENST00000410754 173 ntBASIC4.09□□□□□ -1.75
CCDC96Q2M329 AL161449.1-201ENST00000414531 1199 ntBASIC4.09□□□□□ -1.75
CCDC96Q2M329 AC009518.2-201ENST00000418056 731 ntBASIC4.09□□□□□ -1.75
CCDC96Q2M329 AC006960.1-201ENST00000419980 153 ntBASIC4.09□□□□□ -1.75
CCDC96Q2M329 AL137014.1-201ENST00000420490 1226 ntBASIC4.09□□□□□ -1.75
CCDC96Q2M329 AL139421.1-201ENST00000423010 169 ntBASIC4.09□□□□□ -1.75
CCDC96Q2M329 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC96Q2M329 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC96Q2M329 ATP5F1P1-201ENST00000433775 569 ntBASIC4.09□□□□□ -1.75
CCDC96Q2M329 UBE2D3P1-201ENST00000436669 444 ntBASIC4.09□□□□□ -1.75
CCDC96Q2M329 RABEPKP1-201ENST00000440529 1026 ntBASIC4.09□□□□□ -1.75
CCDC96Q2M329 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC96Q2M329 AL606662.1-201ENST00000445763 553 ntBASIC4.09□□□□□ -1.75
CCDC96Q2M329 AC104978.1-201ENST00000449387 391 ntBASIC4.09□□□□□ -1.75
CCDC96Q2M329 AL133217.1-201ENST00000450980 425 ntBASIC4.09□□□□□ -1.75
CCDC96Q2M329 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC96Q2M329 RPL21P10-201ENST00000463521 490 ntBASIC4.09□□□□□ -1.75
CCDC96Q2M329 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC96Q2M329 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC96Q2M329 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC96Q2M329 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC96Q2M329 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC96Q2M329 PHBP14-201ENST00000512887 367 ntBASIC4.09□□□□□ -1.75
CCDC96Q2M329 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC96Q2M329 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC96Q2M329 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.09□□□□□ -1.75
CCDC96Q2M329 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC96Q2M329 AC008489.1-201ENST00000524271 483 ntBASIC4.09□□□□□ -1.75
CCDC96Q2M329 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms